Fitness for 5 genes in Enterobacter asburiae PDN3

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500 ntEX28DRAFT_0557 and EX28DRAFT_0558 overlap by 4 nucleotidesEX28DRAFT_0558 and EX28DRAFT_0559 overlap by 4 nucleotidesEX28DRAFT_0559 and EX28DRAFT_0560 overlap by 1 nucleotidesEX28DRAFT_0560 and EX28DRAFT_0561 are separated by 496 nucleotides EX28DRAFT_0557: EX28DRAFT_0557 - Antimicrobial peptide resistance and lipid A acylation protein PagP, at 551,404 to 551,979 _0557 EX28DRAFT_0558: EX28DRAFT_0558 - Uncharacterized protein conserved in bacteria, at 551,976 to 552,941 _0558 EX28DRAFT_0559: EX28DRAFT_0559 - Cation/multidrug efflux pump, at 552,938 to 556,000 _0559 EX28DRAFT_0560: EX28DRAFT_0560 - RND family efflux transporter, MFP subunit, at 556,000 to 556,986 _0560 EX28DRAFT_0561: EX28DRAFT_0561 - Universal stress protein UspA and related nucleotide-binding proteins, at 557,483 to 557,914 _0561
Group Condition EX28DRAFT_0557 EX28DRAFT_0558 EX28DRAFT_0559 EX28DRAFT_0560 EX28DRAFT_0561
stress MS_media with m-arsenite 1 mM -0.0 -0.1 +0.1 -0.0 -0.5
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 -0.2 -0.0 +0.3 -0.4
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 -0.1 -0.1 +0.2 -0.4
no stress control M9 with sucrose; no stress control -0.1 -0.1 -0.1 +0.2 -0.2
stress M9 with sucrose and trichloroethylene 76.3 uM +0.1 -0.1 -0.1 +0.2 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.1 -0.0 +0.0 +0.3 -0.4
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.2 -0.2 +0.4 +0.6 -1.0
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.2 -0.0 -0.1 +0.1 -0.2
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.3 -0.2 +0.1 +0.4 -0.5
stress M9 with sucrose and trichloroethylene 76.3 uM +0.1 -0.0 -0.2 -0.1 +0.3
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 -0.1 -0.1 +0.1 +0.3
stress M9 with sucrose and trichloroethylene 76.3 uM +0.1 -0.1 +0.3 +0.3 -0.1
stress M9 with casaminos and trichloroethylene 76.3 uM +0.2 -0.2 +0.1 +0.2 +0.0
no stress control M9 with sucrose; no stress control +0.3 -0.1 +0.0 +0.1 +0.1
no stress control M9 with sucrose; no stress control +0.2 -0.1 +0.0 +0.2 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours +0.0 -0.3 +0.1 +0.6 -0.1
stress M9 with casaminos and trichloroethylene 76.3 uM +0.2 -0.0 -0.1 +0.1 +0.2
no stress control M9 with sucrose; no stress control +0.2 -0.1 +0.1 +0.3 -0.1
no stress control M9 with sucrose; no stress control +0.0 -0.1 +0.2 +0.1 +0.3
stress M9 with casaminos and trichloroethylene 76.3 uM +0.2 -0.0 +0.0 +0.2 +0.1
stress M9 with casaminos and trichloroethylene 76.3 uM +0.1 +0.1 -0.0 +0.4 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.0 -0.0 +0.0 +0.4 +0.1
no stress control M9 with sucrose; no stress control +0.3 -0.1 +0.1 +0.3 -0.1
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.0 +0.1 +0.1 +0.1 +0.4
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.3 -0.1 +0.3 +0.5 -0.1
no stress control M9 with sucrose; no stress control +0.2 -0.0 +0.0 +0.3 +0.4
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.0 -0.0 +0.2 +0.5 +0.2
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.2 +0.2 +0.4 +0.2 +0.1
in planta Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days +0.1 +0.1 +0.2 +0.4 +0.3
in planta Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days -0.1 +0.8 +0.2 +0.8 +0.4
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