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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0380 and EX28DRAFT_0381 are separated by 3 nucleotides
EX28DRAFT_0381 and EX28DRAFT_0382 are separated by 1 nucleotides
EX28DRAFT_0382 and EX28DRAFT_0383 overlap by 1 nucleotides
EX28DRAFT_0383 and EX28DRAFT_0384 are separated by 9 nucleotides
EX28DRAFT_0380: EX28DRAFT_0380 - YejG-like protein, at 352,148 to 352,492
_0380
EX28DRAFT_0381: EX28DRAFT_0381 - ABC-type uncharacterized transport system, duplicated ATPase component, at 352,496 to 354,085
_0381
EX28DRAFT_0382: EX28DRAFT_0382 - ABC-type uncharacterized transport system, permease component, at 354,087 to 355,112
_0382
EX28DRAFT_0383: EX28DRAFT_0383 - ABC-type uncharacterized transport system, permease component, at 355,112 to 356,206
_0383
EX28DRAFT_0384: EX28DRAFT_0384 - ABC-type oligopeptide transport system, periplasmic component, at 356,216 to 358,021
_0384
Group
Condition
EX28DRAFT
_0380
EX28DRAFT
_0381
EX28DRAFT
_0382
EX28DRAFT
_0383
EX28DRAFT
_0384
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.7
-0.9
-0.5
-0.2
stress
MS_media with m-arsenite 1 mM
N.D.
-0.6
-0.9
-0.6
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-1.1
-0.9
+0.1
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.3
-0.8
-0.5
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.3
-1.1
+0.1
-0.1
stress
MS_media with m-arsenite 1 mM
N.D.
-0.5
+0.0
-0.6
-0.1
stress
MS_media with m-arsenite 1 mM
N.D.
-0.4
-0.3
-0.4
+0.1
stress
MS_media with m-arsenite 1 mM
N.D.
-0.4
-0.0
-0.5
-0.0
stress
MS_media with arsenate 5 mM
N.D.
-0.2
+0.1
-0.5
-0.2
no stress control
M9 with sucrose; no stress control
N.D.
-0.1
-0.1
-0.6
-0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
-0.1
-0.4
-0.2
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.1
-0.3
-0.5
+0.1
stress
MS_media with m-arsenite 1 mM
N.D.
-0.6
+0.1
-0.4
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
-0.5
-0.3
+0.0
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.1
-0.2
-0.3
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
+0.2
-0.5
-0.3
-0.1
stress
MS_media with m-arsenite 1 mM
N.D.
-0.4
+0.1
-0.3
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
+0.2
-0.5
+0.0
-0.3
stress
MS_media with arsenate 5 mM
N.D.
-0.5
+0.1
-0.2
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
+0.2
-0.2
-0.3
-0.2
no stress control
MS_media no stress control
N.D.
-0.5
+0.3
-0.2
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
N.D.
+0.3
-0.6
+0.1
-0.1
stress
MS_media with arsenate 5 mM
N.D.
-0.3
+0.1
-0.2
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
+0.2
+0.4
-0.4
-0.2
stress
MS_media with arsenate 5 mM
N.D.
-0.3
+0.4
-0.4
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
N.D.
-0.1
-0.4
+0.0
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
+0.2
+0.1
+0.2
-0.4
stress
MS_media with arsenate 5 mM
N.D.
-0.4
+0.7
-0.3
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
N.D.
-0.1
+0.4
+0.1
+0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
N.D.
+0.3
+0.3
+0.4
-0.2
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