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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0364 and EX28DRAFT_0365 are separated by 69 nucleotides
EX28DRAFT_0365 and EX28DRAFT_0366 are separated by 148 nucleotides
EX28DRAFT_0366 and EX28DRAFT_0367 overlap by 38 nucleotides
EX28DRAFT_0367 and EX28DRAFT_0368 are separated by 187 nucleotides
EX28DRAFT_0364: EX28DRAFT_0364 - Alkylated DNA repair protein, at 334,564 to 335,220
_0364
EX28DRAFT_0365: EX28DRAFT_0365 - cyclic peptide transporter, at 335,290 to 336,933
_0365
EX28DRAFT_0366: EX28DRAFT_0366 - Mg2+ transporter (mgtE), at 337,082 to 338,518
_0366
EX28DRAFT_0367: EX28DRAFT_0367 - Sulfate permease and related transporters (MFS superfamily), at 338,481 to 339,770
_0367
EX28DRAFT_0368: EX28DRAFT_0368 - malate:quinone-oxidoreductase, at 339,958 to 341,607
_0368
Group
Condition
EX28DRAFT
_0364
EX28DRAFT
_0365
EX28DRAFT
_0366
EX28DRAFT
_0367
EX28DRAFT
_0368
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
-0.0
-0.2
-0.1
-0.3
stress
MS_media with arsenate 5 mM
-0.8
+0.1
+0.2
-0.4
-0.1
no stress control
M9 with sucrose; no stress control
+0.2
-0.1
-0.5
-0.4
+0.1
stress
MS_media with arsenate 5 mM
-0.4
+0.1
+0.3
-0.3
-0.2
stress
MS_media with m-arsenite 1 mM
-0.3
-0.1
+0.3
-0.3
+0.1
stress
MS_media with m-arsenite 1 mM
+0.5
-0.0
+0.0
-0.4
-0.4
stress
MS_media with arsenate 5 mM
-0.3
+0.1
+0.3
-0.2
-0.1
no stress control
M9 with sucrose; no stress control
+0.3
-0.0
-0.1
-0.1
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.5
+0.0
-0.0
-0.3
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.2
+0.1
+0.2
-0.2
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.4
+0.0
-0.0
-0.1
-0.3
no stress control
M9 with sucrose; no stress control
+0.5
+0.1
-0.0
-0.1
-0.2
no stress control
M9 with sucrose; no stress control
+0.6
+0.0
-0.2
-0.1
-0.2
no stress control
M9 with sucrose; no stress control
+0.5
+0.0
-0.2
-0.2
+0.1
no stress control
MS_media no stress control
+0.4
+0.0
+0.1
-0.2
+0.0
stress
MS_media with m-arsenite 1 mM
+0.4
-0.0
+0.4
-0.5
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.4
+0.1
+0.2
-0.1
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
+1.1
-0.1
-0.1
-0.2
-0.3
stress
MS_media with arsenate 5 mM
+0.1
+0.2
+0.6
-0.3
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.5
+0.1
+0.8
+0.2
-0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.6
-0.1
-0.1
+0.1
-0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.2
+0.1
+0.2
+0.3
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.1
+0.5
+0.1
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.8
+0.0
-0.1
+0.1
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.8
+0.0
-0.1
-0.1
+0.0
stress
MS_media with arsenate 5 mM
+0.3
+0.1
+0.5
-0.3
+0.1
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.6
+0.1
+0.4
-0.1
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.4
+0.1
+0.4
-0.1
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
+0.2
+0.4
-0.2
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.2
+0.8
+0.0
+0.1
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