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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0298 and EX28DRAFT_0299 are separated by 48 nucleotides
EX28DRAFT_0299 and EX28DRAFT_0300 are separated by 44 nucleotides
EX28DRAFT_0300 and EX28DRAFT_0301 are separated by 13 nucleotides
EX28DRAFT_0301 and EX28DRAFT_0302 are separated by 75 nucleotides
EX28DRAFT_0298: EX28DRAFT_0298 - ABC-type histidine transport system, ATPase component, at 260,069 to 260,842
_0298
EX28DRAFT_0299: EX28DRAFT_0299 - Acetyltransferases, including N-acetylases of ribosomal proteins, at 260,891 to 261,400
_0299
EX28DRAFT_0300: EX28DRAFT_0300 - TIGR01777 family protein, at 261,445 to 262,338
_0300
EX28DRAFT_0301: EX28DRAFT_0301 - FolB domain, at 262,352 to 262,720
_0301
EX28DRAFT_0302: EX28DRAFT_0302 - Glutathione S-transferase, at 262,796 to 263,425
_0302
Group
Condition
EX28DRAFT
_0298
EX28DRAFT
_0299
EX28DRAFT
_0300
EX28DRAFT
_0301
EX28DRAFT
_0302
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
-0.3
-0.3
+0.2
-0.5
stress
MS_media with m-arsenite 1 mM
-0.1
-0.2
+0.2
-0.4
-0.2
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
-0.5
-0.0
+0.3
-0.3
no stress control
M9 with sucrose; no stress control
-0.2
-0.2
-0.4
+0.2
-0.2
no stress control
M9 with sucrose; no stress control
-0.5
-0.0
+0.2
+0.2
-0.4
stress
MS_media with arsenate 5 mM
+0.2
+0.1
-0.6
-0.3
+0.0
no stress control
M9 with sucrose; no stress control
-0.2
+0.3
-0.2
+0.3
-0.3
stress
MS_media with arsenate 5 mM
-0.3
+0.9
-0.6
-0.4
+0.2
stress
MS_media with m-arsenite 1 mM
+0.1
+0.4
-0.1
-0.5
+0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
+0.4
-0.4
+0.4
-0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.3
-0.1
+0.3
-0.3
stress
MS_media with arsenate 5 mM
+0.2
+0.6
-0.0
-0.3
-0.3
no stress control
M9 with sucrose; no stress control
+0.1
+0.4
+0.1
-0.1
-0.2
no stress control
MS_media no stress control
+0.0
+0.6
-0.0
-0.3
+0.2
stress
MS_media with arsenate 5 mM
-0.2
+0.7
+0.1
-0.0
-0.3
stress
MS_media with m-arsenite 1 mM
+0.3
+0.4
+0.1
-0.3
-0.0
no stress control
MS_media no stress control
-0.1
+0.5
-0.3
-0.1
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.3
-0.0
+0.6
-0.2
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.1
+0.6
+0.1
+0.3
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.2
+0.8
-0.2
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
+0.1
+0.4
+0.3
-0.1
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.3
+0.5
+0.1
+0.3
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.3
+0.7
+0.7
-0.6
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
+0.4
+0.3
+0.2
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
-0.2
+0.3
+0.9
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.3
+1.1
+0.3
+0.2
+0.1
stress
MS_media with m-arsenite 1 mM
+0.2
+0.8
+0.2
+0.0
+0.1
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.0
+0.3
+1.2
+0.2
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.5
+0.8
-0.2
+0.3
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.5
+0.4
+0.4
+0.1
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