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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0241 and EX28DRAFT_0242 are separated by 786 nucleotides
EX28DRAFT_0242 and EX28DRAFT_0243 are separated by 38 nucleotides
EX28DRAFT_0243 and EX28DRAFT_0244 are separated by 17 nucleotides
EX28DRAFT_0244 and EX28DRAFT_0245 overlap by 4 nucleotides
EX28DRAFT_0241: EX28DRAFT_0241 - lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase, at 194,832 to 195,749
_0241
EX28DRAFT_0242: EX28DRAFT_0242 - type VI secretion protein, VC_A0107 family, at 196,536 to 197,033
_0242
EX28DRAFT_0243: EX28DRAFT_0243 - type VI secretion protein, EvpB/VC_A0108 family, at 197,072 to 198,610
_0243
EX28DRAFT_0244: EX28DRAFT_0244 - type VI secretion protein, VC_A0114 family, at 198,628 to 199,968
_0244
EX28DRAFT_0245: EX28DRAFT_0245 - type IV / VI secretion system protein, DotU family, at 199,965 to 200,654
_0245
Group
Condition
EX28DRAFT
_0241
EX28DRAFT
_0242
EX28DRAFT
_0243
EX28DRAFT
_0244
EX28DRAFT
_0245
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.2
-0.8
+0.0
+0.1
-0.7
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.3
-1.2
+0.2
+0.1
+0.1
stress
MS_media with m-arsenite 1 mM
+0.1
-1.3
+0.0
+0.1
+0.0
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
-0.8
-0.1
+0.1
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-1.0
+0.1
+0.1
+0.0
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.0
-0.5
+0.0
+0.3
-0.8
stress
MS_media with arsenate 5 mM
+0.3
-0.9
+0.0
+0.0
-0.2
no stress control
M9 with sucrose; no stress control
-0.1
-0.6
+0.1
+0.2
-0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.3
+0.0
+0.2
-0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
-0.3
+0.2
+0.2
-0.6
no stress control
M9 with sucrose; no stress control
+0.0
-0.9
+0.2
+0.1
+0.0
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.1
-1.0
-0.1
+0.1
+0.4
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
-0.4
+0.2
+0.3
-0.6
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.1
-0.5
+0.1
+0.2
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
-0.1
+0.4
+0.1
+0.1
-0.6
no stress control
M9 with sucrose; no stress control
-0.0
-0.6
+0.1
+0.2
+0.1
stress
MS_media with m-arsenite 1 mM
+0.0
-0.7
+0.0
-0.0
+0.5
stress
M9 with casaminos and trichloroethylene 76.3 uM
-0.0
-0.4
+0.2
+0.3
-0.2
stress
MS_media with arsenate 5 mM
-0.0
-0.5
+0.0
+0.2
+0.3
stress
M9 with casaminos and trichloroethylene 76.3 uM
+0.0
-0.6
+0.3
+0.3
+0.0
no stress control
M9 with sucrose; no stress control
+0.1
-0.6
+0.0
+0.3
+0.3
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.2
-0.6
-0.0
+0.1
+0.9
stress
MS_media with m-arsenite 1 mM
+0.2
-0.2
+0.2
-0.4
+0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.3
+0.1
+0.2
+0.2
-0.4
stress
MS_media with arsenate 5 mM
+0.4
-0.3
-0.1
+0.2
+0.3
stress
MS_media with arsenate 5 mM
+0.2
-0.4
+0.0
+0.1
+0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.1
+0.4
+0.2
+0.3
-0.5
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.3
+0.2
+0.2
-0.3
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
-0.1
+0.4
+0.2
+0.7
+0.2
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.2
+0.3
+0.3
+0.4
+0.1
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