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Fitness for 5 genes in
Enterobacter asburiae PDN3
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
EX28DRAFT_0180 and EX28DRAFT_0181 overlap by 1 nucleotides
EX28DRAFT_0181 and EX28DRAFT_0182 are separated by 145 nucleotides
EX28DRAFT_0182 and EX28DRAFT_0183 are separated by 16 nucleotides
EX28DRAFT_0183 and EX28DRAFT_0184 are separated by 109 nucleotides
EX28DRAFT_0180: EX28DRAFT_0180 - Peroxiredoxin, at 130,381 to 130,851
_0180
EX28DRAFT_0181: EX28DRAFT_0181 - Glycine cleavage system regulatory protein, at 130,851 to 131,420
_0181
EX28DRAFT_0182: EX28DRAFT_0182 - 4-hydroxy-tetrahydrodipicolinate synthase, at 131,566 to 132,444
_0182
EX28DRAFT_0183: EX28DRAFT_0183 - Uncharacterized lipoprotein, at 132,461 to 133,495
_0183
EX28DRAFT_0184: EX28DRAFT_0184 - phosphoribosylaminoimidazole-succinocarboxamide synthase (EC 6.3.2.6), at 133,605 to 134,318
_0184
Group
Condition
EX28DRAFT
_0180
EX28DRAFT
_0181
EX28DRAFT
_0182
EX28DRAFT
_0183
EX28DRAFT
_0184
stress
MS_media with m-arsenite 1 mM
-1.6
-1.0
N.D.
+0.1
N.D.
stress
MS_media with m-arsenite 1 mM
-1.3
-1.1
N.D.
+0.4
N.D.
stress
MS_media with m-arsenite 1 mM
-1.4
-0.7
N.D.
+0.1
N.D.
stress
MS_media with m-arsenite 1 mM
-1.5
-0.6
N.D.
+0.3
N.D.
stress
MS_media with arsenate 5 mM
-1.1
-0.7
N.D.
+0.1
N.D.
stress
MS_media with m-arsenite 1 mM
-0.8
-0.8
N.D.
+0.2
N.D.
stress
MS_media with arsenate 5 mM
-0.7
-0.6
N.D.
-0.0
N.D.
stress
MS_media with m-arsenite 1 mM
-0.9
-0.5
N.D.
+0.2
N.D.
stress
MS_media with arsenate 5 mM
-0.6
-0.4
N.D.
-0.1
N.D.
stress
MS_media with arsenate 5 mM
-0.5
-0.6
N.D.
+0.0
N.D.
stress
MS_media with arsenate 5 mM
-0.4
-0.6
N.D.
+0.1
N.D.
no stress control
MS_media no stress control
+0.2
-1.1
N.D.
-0.0
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.7
-0.2
N.D.
+0.2
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.5
-0.3
N.D.
+0.2
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
-0.5
-0.3
N.D.
+0.3
N.D.
no stress control
MS_media no stress control
+0.3
-0.8
N.D.
-0.0
N.D.
no stress control
MS_media no stress control
+0.3
-0.8
N.D.
+0.2
N.D.
no stress control
MS_media no stress control
+0.7
-0.9
N.D.
+0.2
N.D.
stress
M9 with sucrose and trichloroethylene 76.3 uM
+0.5
-0.7
N.D.
+0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.2
-0.9
N.D.
+0.0
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.5
-0.1
N.D.
+0.3
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.0
-0.2
N.D.
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.6
+0.2
N.D.
+0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.9
-0.0
N.D.
+0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+0.8
+0.1
N.D.
+0.2
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+0.8
-0.2
N.D.
+0.6
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+1.3
+0.1
N.D.
-0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=roots; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.2
-0.1
N.D.
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=7_days
+1.2
+0.3
N.D.
+0.1
N.D.
in planta
Plant=poplar; PlantTreatment=None; Sample=rhizosphere; GrowthSubstrate=quartz_sand; Collection=outgrowth_in_MGL; Time=1_hours
+1.2
+0.5
N.D.
-0.1
N.D.
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