Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_04711 and EFB2_04712 overlap by 17 nucleotidesEFB2_04712 and EFB2_04713 are separated by 287 nucleotidesEFB2_04713 and EFB2_04714 overlap by 4 nucleotidesEFB2_04714 and EFB2_04715 are separated by 92 nucleotides EFB2_04711: EFB2_04711 - HTH-type transcriptional activator RhaR, at 4,960,735 to 4,961,673 _04711 EFB2_04712: EFB2_04712 - HTH-type transcriptional activator RhaS, at 4,961,657 to 4,962,493 _04712 EFB2_04713: EFB2_04713 - Rhamnulokinase, at 4,962,781 to 4,964,250 _04713 EFB2_04714: EFB2_04714 - L-rhamnose isomerase, at 4,964,247 to 4,965,506 _04714 EFB2_04715: EFB2_04715 - Rhamnulose-1-phosphate aldolase, at 4,965,599 to 4,966,423 _04715
Group Condition EFB2_04711 EFB2_04712 EFB2_04713 EFB2_04714 EFB2_04715
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 -0.0 -0.1 -0.1 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -0.0 -0.0 -0.0 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -0.1 +0.1 -0.1 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.0 -0.0 -0.1 -0.1 -0.1
no phage control BHIS_CaCl2 no phage control -0.1 +0.2 -0.1 -0.4 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 +0.0 -0.0 -0.1 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.0 -0.1 +0.0 -0.1 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -0.1 -0.0 +0.1 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.1 -0.1 +0.0 -0.0 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -0.1 -0.0 +0.1 +0.0
mixed community no phage control BHIS no phage control with 14 member community -0.1 +0.0 +0.0 +0.0 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.0 -0.1 +0.1 -0.1 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.1 -0.1 +0.0 -0.1 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 -0.1 +0.1 +0.0 +0.0
mixed community no phage control BHIS no phage control with 14 member community +0.1 -0.0 -0.1 +0.0 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community -0.0 +0.1 +0.1 -0.0 -0.1
no phage control BHIS_CaCl2 no phage control +0.1 +0.0 -0.1 -0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.0 -0.0 +0.0 +0.1 -0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.1 +0.0 -0.0 +0.0 -0.1
no phage control BHIS_CaCl2 no phage control +0.1 -0.0 +0.1 -0.0 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 -0.1 +0.0 +0.0 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.1 -0.0 -0.1 +0.0 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 +0.0 +0.1 -0.0 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.0 +0.1 -0.0 +0.1 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.0 +0.0 +0.1 +0.1 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community +0.1 -0.1 +0.2 -0.0 +0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.0 -0.0 +0.1 +0.1 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.1 +0.1 +0.1 +0.0 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 +0.0 +0.0 +0.1 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 +0.0 +0.0 -0.0 +0.1
remove
EFB2_04711
plot		 remove
EFB2_04712
plot		 remove
EFB2_04713		 remove
EFB2_04714
plot		 remove
EFB2_04715
plot