Fitness for 5 genes in Escherichia fergusonii Becca

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	EFB2_04634	EFB2_04635	EFB2_04636	EFB2_04637	EFB2_04638
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	N.D.	N.D.	-4.5	N.D.	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	N.D.	N.D.	-4.5	N.D.	N.D.
mixed community no phage control	BHIS no phage control with 14 member community	N.D.	N.D.	-4.5	N.D.	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	N.D.	N.D.	-4.5	N.D.	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	N.D.	N.D.	-4.5	N.D.	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	N.D.	N.D.	-4.4	N.D.	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	N.D.	N.D.	-3.8	N.D.	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	N.D.	N.D.	-3.8	N.D.	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with 14 member community	N.D.	N.D.	-3.8	N.D.	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	N.D.	N.D.	-3.7	N.D.	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	N.D.	N.D.	-3.7	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; 14 member community	N.D.	N.D.	-3.7	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	N.D.	N.D.	-3.6	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	N.D.	N.D.	-3.6	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	N.D.	N.D.	-3.5	N.D.	N.D.
phage monoculture	BHIS_CaCl2 with hk phage cocktail 1 MOI	N.D.	N.D.	-3.4	N.D.	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	N.D.	N.D.	-2.2	N.D.	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	N.D.	N.D.	-2.1	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	N.D.	N.D.	-2.0	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	N.D.	N.D.	-1.9	N.D.	N.D.
no phage control	BHIS no phage control	N.D.	N.D.	-1.8	N.D.	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	N.D.	N.D.	-1.6	N.D.	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	N.D.	N.D.	-1.4	N.D.	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	N.D.	N.D.	-1.3	N.D.	N.D.
no phage control	BHIS no phage control	N.D.	N.D.	-1.3	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; 14 member community	N.D.	N.D.	-1.3	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	N.D.	N.D.	-1.2	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	N.D.	N.D.	+1.5	N.D.	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	N.D.	N.D.	+1.6	N.D.	N.D.
no phage control	BHIS_CaCl2 no phage control	N.D.	N.D.	+3.8	N.D.	N.D.