Fitness for 5 genes in Escherichia fergusonii Becca

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500 ntEFB2_03864 and EFB2_03865 are separated by 104 nucleotidesEFB2_03865 and EFB2_03866 are separated by 3 nucleotidesEFB2_03866 and EFB2_03867 are separated by 121 nucleotidesEFB2_03867 and EFB2_03868 are separated by 29 nucleotides EFB2_03864: EFB2_03864 - 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ, at 4,046,022 to 4,046,477 _03864 EFB2_03865: EFB2_03865 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 4,046,582 to 4,047,607 _03865 EFB2_03866: EFB2_03866 - Chaperone protein Skp, at 4,047,611 to 4,048,096 _03866 EFB2_03867: EFB2_03867 - Outer membrane protein assembly factor BamA, at 4,048,218 to 4,050,650 _03867 EFB2_03868: EFB2_03868 - Regulator of sigma-E protease RseP, at 4,050,680 to 4,052,032 _03868
Group Condition EFB2_03864 EFB2_03865 EFB2_03866 EFB2_03867 EFB2_03868
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -5.0 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -5.0 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -5.0 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -5.0 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -5.0 N.D. N.D.
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae N.D. N.D. -4.9 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -4.9 N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -4.9 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. -4.9 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. -4.9 N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -4.9 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -4.9 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. -4.9 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -4.9 N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -4.9 N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. -4.9 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. -4.8 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -4.8 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -4.8 N.D. N.D.
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae N.D. N.D. -4.8 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -4.8 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -4.7 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. -4.7 N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. -4.7 N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -4.6 N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -4.2 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -4.1 N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -3.9 N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -3.9 N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -3.7 N.D. N.D.
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