Fitness for 5 genes in Escherichia fergusonii Becca

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500 ntEFB2_03396 and EFB2_03397 are separated by 100 nucleotidesEFB2_03397 and EFB2_03398 are separated by 401 nucleotidesEFB2_03398 and EFB2_03399 are separated by 22 nucleotidesEFB2_03399 and EFB2_03400 are separated by 8 nucleotides EFB2_03396: EFB2_03396 - hypothetical protein, at 3,547,049 to 3,547,558 _03396 EFB2_03397: EFB2_03397 - hypothetical protein, at 3,547,659 to 3,547,865 _03397 EFB2_03398: EFB2_03398 - Potassium-transporting ATPase potassium-binding subunit, at 3,548,267 to 3,549,940 _03398 EFB2_03399: EFB2_03399 - Potassium-transporting ATPase ATP-binding subunit, at 3,549,963 to 3,552,011 _03399 EFB2_03400: EFB2_03400 - Potassium-transporting ATPase KdpC subunit, at 3,552,020 to 3,552,592 _03400
Group Condition EFB2_03396 EFB2_03397 EFB2_03398 EFB2_03399 EFB2_03400
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.0 -0.4 -0.0 -0.1 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -0.3 -0.0 -0.2 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.0 -0.4 +0.1 -0.1 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.0 -0.2 -0.1 -0.0 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 -0.3 -0.2 +0.2 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community +0.2 -0.5 +0.0 -0.1 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.0 -0.4 -0.1 +0.1 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community -0.0 -0.4 -0.0 +0.0 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 -0.4 -0.1 +0.0 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 -0.4 +0.0 -0.1 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community +0.2 -0.5 +0.1 -0.0 -0.0
no phage control BHIS no phage control +0.1 -0.4 -0.1 -0.0 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.2 -0.2 -0.0 -0.1 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 -0.5 +0.1 -0.0 +0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae -0.1 -0.3 +0.0 -0.2 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 -0.2 +0.2 +0.0 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae +0.1 -0.4 -0.0 -0.0 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.0 -0.4 -0.0 +0.0 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 -0.5 +0.1 -0.0 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.2 -0.3 -0.0 +0.0 -0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI +0.0 -0.3 -0.1 -0.0 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -0.4 +0.1 +0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 -0.2 -0.1 +0.2 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae +0.1 -0.3 -0.1 +0.2 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -0.2 -0.1 +0.1 +0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -0.2 +0.1 +0.0 +0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 -0.2 +0.1 +0.0 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.0 -0.1 -0.2 +0.2 +0.4
no phage control BHIS_CaCl2 no phage control +0.5 +0.6 -0.2 -0.3 -0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -0.2 +0.2 +0.1 +0.3
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EFB2_03400
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