Fitness for 5 genes in Escherichia fergusonii Becca

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500 ntEFB2_03150 and EFB2_03151 are separated by 36 nucleotidesEFB2_03151 and EFB2_03152 are separated by 205 nucleotidesEFB2_03152 and EFB2_03153 are separated by 159 nucleotidesEFB2_03153 and EFB2_03154 are separated by 110 nucleotides EFB2_03150: EFB2_03150 - Lipid A export ATP-binding/permease protein MsbA, at 3,296,492 to 3,298,240 _03150 EFB2_03151: EFB2_03151 - hypothetical protein, at 3,298,277 to 3,300,541 _03151 EFB2_03152: EFB2_03152 - Integration host factor subunit beta, at 3,300,747 to 3,301,031 _03152 EFB2_03153: EFB2_03153 - 30S ribosomal protein S1, at 3,301,191 to 3,302,864 _03153 EFB2_03154: EFB2_03154 - Cytidylate kinase, at 3,302,975 to 3,303,658 _03154
Group Condition EFB2_03150 EFB2_03151 EFB2_03152 EFB2_03153 EFB2_03154
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae N.D. -0.1 N.D. N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. -0.1 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. -0.1 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. -0.1 N.D. N.D. N.D.
no phage control BHIS_CaCl2 no phage control N.D. -0.1 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. -0.1 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae N.D. -0.1 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. -0.1 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community N.D. -0.1 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae N.D. -0.1 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. -0.0 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. -0.0 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. -0.0 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. -0.0 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. -0.0 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. +0.0 N.D. N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. +0.0 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. +0.0 N.D. N.D. N.D.
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI N.D. +0.0 N.D. N.D. N.D.
no phage control BHIS_CaCl2 no phage control N.D. +0.0 N.D. N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. +0.0 N.D. N.D. N.D.
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae N.D. +0.1 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. +0.1 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. +0.1 N.D. N.D. N.D.
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. +0.1 N.D. N.D. N.D.
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. +0.1 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community N.D. +0.1 N.D. N.D. N.D.
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. +0.1 N.D. N.D. N.D.
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae N.D. +0.1 N.D. N.D. N.D.
no phage control BHIS no phage control N.D. +0.1 N.D. N.D. N.D.
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