Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_03117 and EFB2_03118 are separated by 69 nucleotidesEFB2_03118 and EFB2_03119 are separated by 255 nucleotidesEFB2_03119 and EFB2_03120 overlap by 4 nucleotidesEFB2_03120 and EFB2_03121 are separated by 4 nucleotides EFB2_03117: EFB2_03117 - 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase, at 3,255,488 to 3,256,114 _03117 EFB2_03118: EFB2_03118 - Ribosome modulation factor, at 3,256,184 to 3,256,351 _03118 EFB2_03119: EFB2_03119 - Intermembrane transport lipoprotein PqiC, at 3,256,607 to 3,257,170 _03119 EFB2_03120: EFB2_03120 - Intermembrane transport protein PqiB, at 3,257,167 to 3,258,807 _03120 EFB2_03121: EFB2_03121 - Intermembrane transport protein PqiA, at 3,258,812 to 3,260,065 _03121
Group Condition EFB2_03117 EFB2_03118 EFB2_03119 EFB2_03120 EFB2_03121
no phage control BHIS_CaCl2 no phage control N.D. N.D. -1.3 -0.7 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -0.9 -0.1 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -0.5 -0.3 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -0.4 -0.2 -0.0
no phage control BHIS no phage control N.D. N.D. -0.6 -0.1 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae N.D. N.D. -0.5 -0.0 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -0.7 +0.2 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -0.3 -0.2 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. -0.3 -0.1 -0.0
mixed community no phage control BHIS no phage control with 14 member community N.D. N.D. -0.3 -0.2 +0.0
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae N.D. N.D. -0.2 -0.2 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -0.4 -0.0 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -0.3 +0.1 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -0.4 +0.1 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae N.D. N.D. -0.4 +0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. -0.2 -0.2 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. +0.1 -0.4 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. +0.0 -0.3 +0.2
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae N.D. N.D. -0.2 -0.2 +0.2
mixed community no phage control BHIS no phage control with 14 member community N.D. N.D. -0.4 +0.1 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -0.1 -0.1 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -0.1 -0.1 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) N.D. N.D. -0.3 +0.1 +0.2
no phage control BHIS_CaCl2 no phage control N.D. N.D. -0.2 +0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) N.D. N.D. -0.3 +0.3 +0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI N.D. N.D. -0.2 +0.1 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community N.D. N.D. +0.0 +0.2 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. +0.4 +0.1 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) N.D. N.D. +0.0 +0.2 +0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) N.D. N.D. +0.3 +0.0 +0.2
remove
EFB2_03117
plot		 remove
EFB2_03118
plot		 remove
EFB2_03119		 remove
EFB2_03120
plot		 remove
EFB2_03121
plot