Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_02639 and EFB2_02640 are separated by 147 nucleotidesEFB2_02640 and EFB2_02641 are separated by 89 nucleotidesEFB2_02641 and EFB2_02642 are separated by 268 nucleotidesEFB2_02642 and EFB2_02643 are separated by 125 nucleotides EFB2_02639: EFB2_02639 - Cyclic di-GMP phosphodiesterase PdeR, at 2,794,641 to 2,796,626 _02639 EFB2_02640: EFB2_02640 - hypothetical protein, at 2,796,774 to 2,796,947 _02640 EFB2_02641: EFB2_02641 - Glucitol operon repressor, at 2,797,037 to 2,797,786 _02641 EFB2_02642: EFB2_02642 - Osmotically-inducible lipoprotein B, at 2,798,055 to 2,798,273 _02642 EFB2_02643: EFB2_02643 - putative protein YciH, at 2,798,399 to 2,798,725 _02643
Group Condition EFB2_02639 EFB2_02640 EFB2_02641 EFB2_02642 EFB2_02643
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae -0.1 -0.8 -0.3 +0.2 -0.2
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI +0.1 -0.3 -0.2 -0.1 -0.6
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -0.3 -0.2 +0.3 -0.4
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.1 -0.2 -0.1 +0.2 -0.6
no phage control BHIS no phage control +0.2 -0.3 +0.1 -0.4 -0.4
mixed community no phage control BHIS no phage control with 14 member community +0.2 -0.4 +0.1 -0.5 -0.1
no phage control BHIS no phage control +0.1 -0.3 +0.2 -0.4 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.0 -0.5 +0.2 +0.1 -0.5
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.1 +0.3 +0.2 -0.5 -0.5
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.2 +0.1 -0.3 +0.5 -0.5
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.0 +0.2 +0.3 -0.5 -0.4
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 +0.2 +0.2 -0.1 -0.6
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -0.4 -0.1 -0.2 +0.5
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae +0.2 +0.5 -0.5 -0.3 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 -0.1 -0.2 +0.4 -0.4
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.3 -0.5 -0.2 +0.6 +0.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.0 -0.2 +0.2 +0.4 -0.4
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community +0.2 +0.3 -0.2 +0.3 -0.5
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.1 +0.2 -0.3 +0.3 -0.3
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI -0.3 +0.1 -0.1 +0.7 -0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 -0.3 +0.0 -0.3 +0.6
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.4 -0.5 +0.1 +0.5 +0.6
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae -0.2 +0.2 +0.2 +0.4 -0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -0.1 +0.3 +0.4 -0.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 +0.4 +0.1 +0.6 -0.5
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 +0.3 -0.1 +0.9 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 +0.7 +0.4 -0.1 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.1 +0.1 +0.3 +0.3 +0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.0 +0.0 +0.5 +0.8 +0.2
no phage control BHIS_CaCl2 no phage control +0.8 +0.1 -0.1 +0.2 +0.3
remove
EFB2_02639
plot		 remove
EFB2_02640
plot		 remove
EFB2_02641		 remove
EFB2_02642
plot		 remove
EFB2_02643
plot