Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_02525 and EFB2_02526 overlap by 4 nucleotidesEFB2_02526 and EFB2_02527 are separated by 79 nucleotidesEFB2_02527 and EFB2_02528 are separated by 95 nucleotidesEFB2_02528 and EFB2_02529 are separated by 693 nucleotides EFB2_02525: EFB2_02525 - putative nitrate reductase molybdenum cofactor assembly chaperone NarW, at 2,660,214 to 2,660,909 _02525 EFB2_02526: EFB2_02526 - Respiratory nitrate reductase 2 gamma chain, at 2,660,906 to 2,661,586 _02526 EFB2_02527: EFB2_02527 - putative isomerase YddE, at 2,661,666 to 2,662,559 _02527 EFB2_02528: EFB2_02528 - Arylamine N-acetyltransferase, at 2,662,655 to 2,663,500 _02528 EFB2_02529: EFB2_02529 - Actin cross-linking toxin VgrG1, at 2,664,194 to 2,665,789 _02529
Group Condition EFB2_02525 EFB2_02526 EFB2_02527 EFB2_02528 EFB2_02529
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae -0.1 -1.5 +0.2 -0.0 +0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.4 +0.0 -0.3 +0.3 -0.4
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 -0.4 +0.0 -0.4 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 -0.5 -0.0 -0.2 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.5 -0.0 -0.0 -0.2 -0.8
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.0 -0.8 +0.3 -0.3 +0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.3 -0.2 -0.0 +0.1 -0.7
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.2 -0.4 -0.1 -0.1 +0.0
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI -0.2 -0.5 +0.2 -0.0 +0.1
no phage control BHIS no phage control -0.1 +0.3 -0.1 -0.1 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community +0.2 -0.2 +0.1 -0.3 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.4 -0.8 +0.3 +0.1 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community +0.2 +0.1 +0.3 -0.3 -0.4
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.3 -0.4 +0.1 -0.1 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.4 +0.2 +0.1 +0.2 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community +0.6 -0.3 +0.1 -0.2 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.3 -0.1 +0.2 -0.3 +0.2
no phage control BHIS_CaCl2 no phage control +0.6 +0.0 +0.2 -0.5 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.3 -0.2 +0.3 -0.2 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.5 -0.2 +0.1 +0.0 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.2 -0.1 +0.2 -0.2 +0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 +0.2 +0.2 +0.3 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.3 +0.4 -0.0 -0.4 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.2 -0.2 -0.0 -0.1 +0.5
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.3 +0.2 +0.3 -0.1 -0.1
mixed community no phage control BHIS no phage control with 14 member community +0.4 +0.1 +0.3 +0.1 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae +0.5 +0.0 +0.1 +0.1 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.3 -0.1 +0.3 -0.0 +0.4
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.3 +0.2 +0.2 +0.2 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.7 -0.1 -0.1 +0.2 +0.4
remove
EFB2_02525
plot		 remove
EFB2_02526
plot		 remove
EFB2_02527		 remove
EFB2_02528
plot		 remove
EFB2_02529
plot