Fitness for 5 genes in Escherichia fergusonii Becca

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500 ntEFB2_02150 and EFB2_02151 are separated by 3 nucleotidesEFB2_02151 and EFB2_02152 are separated by 177 nucleotidesEFB2_02152 and EFB2_02153 overlap by 1 nucleotidesEFB2_02153 and EFB2_02154 overlap by 1 nucleotides EFB2_02150: EFB2_02150 - hypothetical protein, at 2,284,973 to 2,285,413 _02150 EFB2_02151: EFB2_02151 - hypothetical protein, at 2,285,417 to 2,285,869 _02151 EFB2_02152: EFB2_02152 - hypothetical protein, at 2,286,047 to 2,288,035 _02152 EFB2_02153: EFB2_02153 - hypothetical protein, at 2,288,035 to 2,288,622 _02153 EFB2_02154: EFB2_02154 - hypothetical protein, at 2,288,622 to 2,288,924 _02154
Group Condition EFB2_02150 EFB2_02151 EFB2_02152 EFB2_02153 EFB2_02154
no phage control BHIS_CaCl2 no phage control -0.5 -2.8 -0.1 -0.0 -1.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -0.6 -1.0 -0.4 -0.5 -0.5
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -1.4 -0.5 -0.2 -0.2 -0.6
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.6 -0.7 -0.2 -0.4 -0.8
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community -0.5 -1.1 -0.4 -0.1 -0.5
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.9 -0.1 -0.5 -0.6 -0.5
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.6 -0.3 -0.4 -0.8 -0.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.4 -0.3 -0.4 -0.4 -1.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.6 -0.4 -0.4 -0.3 -0.5
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.5 -0.9 -0.5 -0.0 -0.3
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae -0.5 -0.6 -0.4 -0.4 -0.3
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.7 -0.2 -0.4 -0.5 -0.5
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -1.0 -0.2 -0.3 -0.1 -0.6
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.7 +0.2 -0.4 -0.6 -0.7
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.5 -0.8 -0.3 -0.1 -0.4
no phage control BHIS_CaCl2 no phage control -0.6 -0.6 -0.3 -0.2 -0.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.6 -0.1 -0.6 -0.2 -0.5
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.6 -0.3 -0.3 -0.2 -0.5
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 -0.7 -0.1 -0.7 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae -0.9 -0.4 -0.3 -0.2 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -1.0 -0.4 -0.2 -0.3 -0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.4 -0.7 -0.4 -0.4 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.3 -0.6 -0.1 -0.5 -0.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.9 +0.2 -0.2 -0.3 -0.4
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.7 +0.3 -0.4 -0.4 -0.5
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.9 +0.2 -0.3 -0.1 -0.5
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.8 +0.2 -0.4 -0.3 -0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.7 +0.3 -0.2 -0.4 -0.3
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.8 +0.6 -0.5 -0.3 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -0.3 +0.4 -0.3 -0.6 -0.2
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