Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_01753 and EFB2_01754 overlap by 4 nucleotidesEFB2_01754 and EFB2_01755 are separated by 64 nucleotidesEFB2_01755 and EFB2_01756 are separated by 60 nucleotidesEFB2_01756 and EFB2_01757 overlap by 27 nucleotides EFB2_01753: EFB2_01753 - Hydroxyethylthiazole kinase, at 1,855,345 to 1,856,133 _01753 EFB2_01754: EFB2_01754 - Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase, at 1,856,130 to 1,856,930 _01754 EFB2_01755: EFB2_01755 - hypothetical protein, at 1,856,995 to 1,857,804 _01755 EFB2_01756: EFB2_01756 - HTH-type transcriptional repressor NagR, at 1,857,865 to 1,858,611 _01756 EFB2_01757: EFB2_01757 - 2-dehydro-3-deoxygluconokinase, at 1,858,585 to 1,859,550 _01757
Group Condition EFB2_01753 EFB2_01754 EFB2_01755 EFB2_01756 EFB2_01757
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.0 -0.3 +0.2 -0.7 -0.3
no phage control BHIS_CaCl2 no phage control -0.6 +0.0 -0.3 -0.2 -0.0
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae -0.2 -0.3 +0.0 -0.3 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.3 +0.0 +0.2 -0.4 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.5 +0.1 +0.0 -0.4 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.2 +0.1 -0.1 -0.4 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.0 -0.0 +0.2 -0.4 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.2 +0.2 -0.4 +0.1 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.3 +0.2 -0.4 +0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.4 +0.1 +0.0 -0.3 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -0.1 +0.1 +0.1 -0.2 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 -0.3 -0.2 -0.1 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae -0.2 +0.1 -0.2 -0.2 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.0 +0.1 +0.1 -0.2 -0.4
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.2 -0.2 -0.0 -0.1 -0.3
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.5 +0.3 -0.0 +0.1 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.2 +0.1 -0.3 +0.2 -0.3
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI +0.1 -0.1 -0.1 -0.2 +0.2
mixed community no phage control BHIS no phage control with 14 member community -0.3 +0.2 +0.0 -0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 +0.2 +0.1 -0.1 -0.1
mixed community no phage control BHIS no phage control with 14 member community +0.1 -0.1 +0.2 +0.1 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 +0.2 -0.0 -0.3 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae +0.1 -0.2 -0.1 +0.1 +0.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.3 -0.0 +0.0 +0.4 +0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.2 +0.1 +0.2 +0.1 -0.2
mixed community no phage control BHIS no phage control with 14 member community +0.1 +0.2 +0.2 -0.4 +0.3
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.2 +0.1 -0.1 +0.3 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.2 +0.1 +0.1 +0.3 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 +0.0 +0.2 +0.3 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.2 +0.1 +0.2 +0.0 +0.2
remove
EFB2_01753
plot		 remove
EFB2_01754
plot		 remove
EFB2_01755		 remove
EFB2_01756
plot		 remove
EFB2_01757
plot