Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_01692 and EFB2_01693 are separated by 93 nucleotidesEFB2_01693 and EFB2_01694 are separated by 66 nucleotidesEFB2_01694 and EFB2_01695 are separated by 129 nucleotidesEFB2_01695 and EFB2_01696 are separated by 267 nucleotides EFB2_01692: EFB2_01692 - Pseudouridine-5'-phosphate glycosidase, at 1,783,014 to 1,783,952 _01692 EFB2_01693: EFB2_01693 - Putative pseudouridine transporter, at 1,784,046 to 1,785,296 _01693 EFB2_01694: EFB2_01694 - Regulatory protein YeiL, at 1,785,363 to 1,786,061 _01694 EFB2_01695: EFB2_01695 - Pyrimidine-specific ribonucleoside hydrolase RihB, at 1,786,191 to 1,787,132 _01695 EFB2_01696: EFB2_01696 - Pseudouridine kinase, at 1,787,400 to 1,788,488 _01696
Group Condition EFB2_01692 EFB2_01693 EFB2_01694 EFB2_01695 EFB2_01696
no phage control BHIS_CaCl2 no phage control -0.6 -0.1 -1.2 +0.5 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.9 -0.2 -0.1 +0.1 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.6 -0.2 -0.1 -0.0 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.5 +0.1 +0.0 -0.2 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.6 -0.1 -0.0 -0.2 +0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae -0.5 +0.0 -0.1 -0.1 -0.0
mixed community no phage control BHIS no phage control with 14 member community -0.6 -0.1 +0.1 -0.1 +0.0
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI -0.1 -0.1 -0.0 -0.4 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.6 +0.0 -0.0 -0.1 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 -0.2 -0.1 +0.0 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.1 -0.2 -0.3 -0.1 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 -0.2 -0.1 -0.3 -0.0
no phage control BHIS no phage control -0.2 -0.1 -0.1 -0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.0 -0.1 -0.3 +0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 +0.1 -0.2 -0.0 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.2 -0.2 +0.3 -0.1 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 -0.2 +0.1 -0.2 -0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.5 +0.0 -0.0 +0.2 +0.1
no phage control BHIS no phage control -0.3 +0.0 +0.2 -0.1 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.2 -0.1 -0.1 +0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 -0.1 -0.2 +0.2 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -0.3 +0.1 +0.1 +0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.3 +0.1 -0.1 -0.1 -0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI +0.3 -0.0 -0.2 +0.0 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.3 +0.1 -0.2 +0.0 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.5 -0.0 +0.3 +0.4 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.3 +0.1 -0.0 -0.1 +0.1
mixed community no phage control BHIS no phage control with 14 member community +0.1 +0.1 +0.3 -0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae -0.1 -0.2 +0.4 +0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.5 -0.0 -0.3 +0.1 +0.1
remove
EFB2_01692
plot		 remove
EFB2_01693
plot		 remove
EFB2_01694		 remove
EFB2_01695
plot		 remove
EFB2_01696
plot