Fitness for 5 genes in Escherichia fergusonii Becca

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Top 30 experiments (either direction), sorted by average fitness

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500 ntEFB2_01560 and EFB2_01561 are separated by 231 nucleotidesEFB2_01561 and EFB2_01562 are separated by 74 nucleotidesEFB2_01562 and EFB2_01563 are separated by 337 nucleotidesEFB2_01563 and EFB2_01564 are separated by 82 nucleotides EFB2_01560: EFB2_01560 - hypothetical protein, at 1,630,817 to 1,632,295 _01560 EFB2_01561: EFB2_01561 - Phosphate acetyltransferase, at 1,632,527 to 1,634,671 _01561 EFB2_01562: EFB2_01562 - Acetate kinase, at 1,634,746 to 1,635,948 _01562 EFB2_01563: EFB2_01563 - hypothetical protein, at 1,636,286 to 1,636,741 _01563 EFB2_01564: EFB2_01564 - hypothetical protein, at 1,636,824 to 1,637,318 _01564
Group Condition EFB2_01560 EFB2_01561 EFB2_01562 EFB2_01563 EFB2_01564
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 -2.4 -2.6 -0.8 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -2.7 -2.9 -0.3 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -2.6 -2.8 -0.2 -0.1
no phage control BHIS no phage control +0.1 -2.6 -2.9 -0.1 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.0 -2.6 -2.8 +0.0 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -2.5 -2.7 -0.3 -0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.0 -2.6 -2.8 -0.2 +0.1
mixed community no phage control BHIS no phage control with 14 member community -0.1 -2.3 -2.7 -0.1 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 -2.5 -2.7 -0.1 +0.1
no phage control BHIS no phage control -0.0 -2.5 -2.3 -0.3 -0.0
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae -0.1 -2.1 -2.8 +0.1 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.0 -2.6 -2.3 +0.0 -0.2
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.2 -2.3 -2.7 -0.1 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -2.2 -2.4 -0.3 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -2.5 -2.1 -0.4 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.0 -2.5 -2.7 +0.4 -0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.1 -2.5 -2.7 +0.3 -0.0
no phage control BHIS no phage control -0.0 -2.0 -2.8 +0.1 +0.0
mixed community no phage control BHIS no phage control with 14 member community +0.1 -2.0 -2.8 +0.1 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.2 -2.4 -1.7 -0.2 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.0 -2.3 -1.9 -0.1 -0.2
mixed community no phage control BHIS no phage control with 14 member community -0.1 -2.0 -2.6 +0.3 +0.1
no phage control BHIS_CaCl2 no phage control -0.1 -2.5 -1.8 +0.1 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 -2.4 -1.7 +0.1 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.0 -2.4 -1.7 -0.1 -0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI +0.0 -2.3 -1.7 -0.2 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -2.1 -1.6 -0.4 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -2.4 -1.7 +0.1 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 -2.3 -1.7 +0.1 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.0 -2.3 -1.6 +0.2 +0.1
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EFB2_01560
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