Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_01503 and EFB2_01504 are separated by 55 nucleotidesEFB2_01504 and EFB2_01505 are separated by 4 nucleotidesEFB2_01505 and EFB2_01506 are separated by 415 nucleotidesEFB2_01506 and EFB2_01507 overlap by 1 nucleotides EFB2_01503: EFB2_01503 - Acetyl-CoA:oxalate CoA-transferase, at 1,571,674 to 1,572,819 _01503 EFB2_01504: EFB2_01504 - Sensor protein EvgS, at 1,572,875 to 1,576,468 _01504 EFB2_01505: EFB2_01505 - DNA-binding transcriptional activator EvgA, at 1,576,473 to 1,577,087 _01505 EFB2_01506: EFB2_01506 - putative multidrug resistance protein EmrK, at 1,577,503 to 1,578,666 _01506 EFB2_01507: EFB2_01507 - putative multidrug resistance protein EmrY, at 1,578,666 to 1,580,204 _01507
Group Condition EFB2_01503 EFB2_01504 EFB2_01505 EFB2_01506 EFB2_01507
no phage control BHIS_CaCl2 no phage control +0.1 +0.2 -2.8 -0.3 -0.4
mixed community no phage control BHIS no phage control with 14 member community -0.1 +0.0 -0.6 +0.0 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -0.1 -0.5 -0.2 +0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.0 +0.1 -0.6 -0.1 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.0 -0.0 -0.0 -0.3 -0.3
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community -0.1 -0.1 -0.2 -0.1 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.0 +0.0 -0.5 +0.1 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae -0.1 -0.1 +0.2 -0.1 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community +0.0 -0.0 +0.2 -0.2 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 -0.1 +0.2 +0.0 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 +0.2 -0.6 +0.1 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -0.1 +0.2 -0.1 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.2 +0.1 -0.1 +0.1 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 +0.0 +0.4 -0.2 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae -0.1 -0.1 +0.3 +0.1 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 -0.1 +0.4 -0.1 -0.1
mixed community no phage control BHIS no phage control with 14 member community -0.2 +0.0 +0.2 +0.1 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community -0.1 -0.0 +0.2 +0.2 -0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI -0.2 -0.0 +0.4 -0.1 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 -0.1 -0.1 +0.2 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 -0.0 +0.5 -0.3 +0.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae +0.0 -0.1 +0.4 -0.2 +0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 -0.1 +0.3 +0.2 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 +0.2 +0.1 +0.2 -0.2
no phage control BHIS_CaCl2 no phage control +0.1 +0.1 +0.3 -0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae -0.1 +0.1 +0.2 +0.2 +0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 +0.2 +0.3 +0.2 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.0 +0.0 +0.5 +0.1 +0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 +0.1 +0.6 +0.0 +0.0
mixed community no phage control BHIS no phage control with 14 member community +0.2 +0.1 +0.2 -0.0 +0.3
remove
EFB2_01503
plot		 remove
EFB2_01504
plot		 remove
EFB2_01505		 remove
EFB2_01506
plot		 remove
EFB2_01507
plot