Fitness for 5 genes in Escherichia fergusonii Becca

Top 30 experiments (either direction), sorted by average fitness

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Group	Condition	EFB2_01324	EFB2_01325	EFB2_01326	EFB2_01327	EFB2_01328
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	-3.9	-4.8	+0.1	-1.2	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	-2.9	-5.2	-0.0	-1.3	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	-1.8	-5.4	+0.2	-1.9	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-2.7	-4.9	+0.0	-0.8	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	-1.3	-5.3	-0.2	-1.5	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	-1.6	-5.4	+0.0	-1.0	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-1.5	-5.4	+0.0	-1.1	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	-1.3	-5.4	-0.1	-1.1	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	-2.0	-4.5	-0.1	-1.1	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-1.3	-5.0	+0.0	-1.2	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	-2.9	-2.9	+0.1	-1.4	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-1.8	-3.8	-0.0	-1.3	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	-0.7	-5.0	-0.1	-1.1	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	-2.4	-3.3	+0.0	-1.1	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-1.4	-3.4	-0.1	-1.4	N.D.
no phage control	BHIS_CaCl2 no phage control	-2.0	-2.9	-0.6	-0.7	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-1.0	-4.0	-0.0	-1.1	N.D.
mixed community no phage control	BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	-0.8	-4.2	+0.0	-0.9	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-0.4	-4.1	-0.1	-1.2	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	-2.5	-2.1	+0.0	-1.3	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	-1.7	-2.7	+0.1	-1.5	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	-2.2	-2.4	-0.2	-1.1	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	-2.1	-2.2	-0.1	-1.1	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-0.6	-4.0	+0.1	-1.1	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2)	-1.4	-2.2	-0.0	-1.7	N.D.
mixed community no phage control	BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2)	-0.9	-3.2	+0.0	-1.3	N.D.
mixed community no phage control	BHIS no phage control with 14 member community plus Klebsiella pneumoniae	-2.2	-1.5	-0.1	-1.4	N.D.
mixed community no phage control	BHIS no phage control with 14 member community	-1.9	-1.6	-0.1	-1.4	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1)	-1.6	-2.4	-0.1	-0.9	N.D.
phage mixed community	phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1)	-0.6	-2.8	+0.2	-1.7	N.D.