Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_00952 and EFB2_00953 are separated by 173 nucleotidesEFB2_00953 and EFB2_00954 overlap by 1 nucleotidesEFB2_00954 and EFB2_00955 are separated by 36 nucleotidesEFB2_00955 and EFB2_00956 are separated by 12 nucleotides EFB2_00952: EFB2_00952 - putative protein YggR, at 977,841 to 978,821 _00952 EFB2_00953: EFB2_00953 - Putative pre-16S rRNA nuclease, at 978,995 to 979,411 _00953 EFB2_00954: EFB2_00954 - hypothetical protein, at 979,411 to 980,046 _00954 EFB2_00955: EFB2_00955 - Glutathione synthetase, at 980,083 to 981,033 _00955 EFB2_00956: EFB2_00956 - Ribosomal RNA small subunit methyltransferase E, at 981,046 to 981,777 _00956
Group Condition EFB2_00952 EFB2_00953 EFB2_00954 EFB2_00955 EFB2_00956
no phage control BHIS no phage control +0.0 N.D. -0.3 -0.6 -0.2
mixed community no phage control BHIS no phage control with 14 member community +0.0 N.D. -0.2 -0.5 -0.3
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae -0.1 N.D. -0.2 -0.7 -0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI +0.0 N.D. -0.4 -0.5 -0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 N.D. -0.2 -0.5 -0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI -0.1 N.D. -0.2 -0.5 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 N.D. -0.4 -0.4 -0.1
no phage control BHIS no phage control +0.2 N.D. -0.3 -0.6 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 N.D. -0.2 -0.2 -0.3
no phage control BHIS_CaCl2 no phage control -0.1 N.D. -0.1 -0.4 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae -0.0 N.D. -0.2 -0.5 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.0 N.D. -0.2 -0.3 -0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.0 N.D. -0.3 -0.3 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.1 N.D. -0.2 -0.5 -0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae -0.1 N.D. -0.2 -0.3 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community +0.0 N.D. -0.2 -0.3 -0.2
no phage control BHIS_CaCl2 no phage control -0.5 N.D. +0.3 -0.8 +0.4
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -0.0 N.D. +0.2 -0.4 -0.3
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 N.D. -0.3 -0.2 -0.2
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -0.1 N.D. +0.1 -0.4 -0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI +0.1 N.D. -0.0 -0.6 -0.0
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.2 N.D. -0.2 -0.3 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.2 N.D. +0.1 -0.4 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 N.D. -0.1 -0.4 -0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.1 N.D. -0.3 -0.3 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community +0.1 N.D. +0.2 -0.4 -0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 N.D. +0.2 -0.3 -0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 N.D. +0.3 -0.3 -0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.1 N.D. +0.1 -0.2 -0.3
no phage control BHIS no phage control +0.2 N.D. +0.1 -0.4 +0.1
remove
EFB2_00952
plot		 remove
EFB2_00953
plot		 remove
EFB2_00954		 remove
EFB2_00955
plot		 remove
EFB2_00956
plot