Fitness for 5 genes in Escherichia fergusonii Becca

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 63 experiments or choose conditions or try the comparative fitness browser

500 ntEFB2_00678 and EFB2_00679 are separated by 54 nucleotidesEFB2_00679 and EFB2_00680 overlap by 11 nucleotidesEFB2_00680 and EFB2_00681 are separated by 38 nucleotidesEFB2_00681 and EFB2_00682 are separated by 166 nucleotides EFB2_00678: EFB2_00678 - Glucosamine-6-phosphate deaminase, at 684,820 to 685,533 _00678 EFB2_00679: EFB2_00679 - PTS system mannose-specific EIID component, at 685,588 to 686,379 _00679 EFB2_00680: EFB2_00680 - N-acetylgalactosamine permease IIC component 1, at 686,369 to 687,172 _00680 EFB2_00681: EFB2_00681 - PTS system sorbose-specific EIIB component, at 687,211 to 687,687 _00681 EFB2_00682: EFB2_00682 - D-tagatose-1,6-bisphosphate aldolase subunit KbaY, at 687,854 to 688,714 _00682
Group Condition EFB2_00678 EFB2_00679 EFB2_00680 EFB2_00681 EFB2_00682
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -0.1 +0.1 -0.1 -0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -0.3 -0.0 -0.0 -0.1 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 +0.1 +0.1 -0.4 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.0 +0.0 +0.1 -0.2 -0.2
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae -0.2 -0.0 +0.1 -0.2 +0.2
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 +0.1 -0.0 -0.2 +0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 -0.0 -0.1 -0.3 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.1 -0.1 +0.1 -0.4 +0.1
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 +0.1 +0.1 -0.1 +0.0
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community plus Klebsiella pneumoniae +0.1 +0.1 +0.0 -0.3 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 +0.0 -0.0 -0.2 +0.1
phage monoculture BHIS_CaCl2 with hk phage cocktail 1 MOI +0.1 -0.1 +0.1 -0.2 +0.1
mixed community no phage control BHIS no phage control with 14 member community plus Klebsiella pneumoniae +0.0 +0.1 +0.0 -0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) +0.0 +0.1 -0.0 -0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.2 +0.1 -0.1 +0.1 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) +0.1 -0.0 +0.0 -0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.0 -0.1 -0.1 -0.1 +0.3
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 -0.0 +0.1 -0.1 +0.2
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.1 -0.0 +0.1 +0.2 -0.0
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community -0.1 -0.0 -0.1 +0.4 -0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 2) -0.1 +0.1 +0.1 +0.1 +0.1
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) -0.1 +0.0 -0.0 +0.1 +0.3
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, standard diet, mouse 1) -0.0 +0.0 -0.0 +0.3 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae +0.1 -0.0 -0.0 +0.3 -0.0
mixed community no phage control BHIS_CaCl2 no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) +0.1 -0.0 +0.0 -0.0 +0.3
mixed community no phage control BHIS_CaCl2 no phage control with 14 member community +0.1 +0.1 -0.0 +0.2 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; 14 member community plus Klebsiella pneumoniae +0.2 +0.0 -0.1 +0.3 +0.1
phage mixed community phage mixed community; hk phage cocktail 1 MOI; stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 2) +0.2 +0.1 +0.0 +0.0 +0.0
mixed community no phage control BHIS no phage control with stool-derived community from humanized mice (condition: pre-antibiotic, MAC-deficient diet, mouse 1) -0.1 +0.2 +0.1 +0.5 +0.1
no phage control BHIS_CaCl2 no phage control +0.6 +0.3 +0.2 +0.3 +0.2
remove
EFB2_00678
plot		 remove
EFB2_00679
plot		 remove
EFB2_00680		 remove
EFB2_00681
plot		 remove
EFB2_00682
plot