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Fitness for 5 genes in
Escherichia coli BL21
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500 nt
ECD_04255 and ECD_04256 overlap by 29 nucleotides
ECD_04256 and ECD_04257 are separated by 257 nucleotides
ECD_04257 and ECD_04258 are separated by 126 nucleotides
ECD_04258 and ECD_04259 are separated by 51 nucleotides
ECD_04255: ECD_04255 - putative pyruvate formate lyase activating enzyme, at 4,533,055 to 4,533,918
_04255
ECD_04256: ECD_04256 - DUF3029 family protein, putative glycine radical enzyme, at 4,533,890 to 4,535,440
_04256
ECD_04257: ECD_04257 - 2-deoxyribose-5-phosphate aldolase, NAD(P)-linked, at 4,535,698 to 4,536,477
_04257
ECD_04258: ECD_04258 - thymidine phosphorylase, at 4,536,604 to 4,537,926
_04258
ECD_04259: ECD_04259 - phosphopentomutase, at 4,537,978 to 4,539,201
_04259
Group
Condition
ECD
_04255
ECD
_04256
ECD
_04257
ECD
_04258
ECD
_04259
phage
lambda1857_phage_12.5_MOI
+0.3
-0.2
+0.5
+0.2
-2.8
phage
Bas52
-0.2
+0.2
+0.4
-0.1
-2.1
phage
Laval1257
-0.7
-0.3
-0.1
-0.1
-0.5
phage
Bas52
-0.4
+0.1
+0.2
+0.1
-1.6
phage
Laval1259
-0.1
+0.0
+0.2
-0.0
-1.5
phage
Bas50
-0.2
+0.0
-0.2
-0.1
-0.9
phage
CM1
+0.3
+0.4
-0.2
+0.4
-2.2
phage
Bas29
-0.2
+0.1
-0.0
-0.0
-0.9
phage
EV152
-0.3
-0.2
+0.3
-0.2
-0.6
phage
Ox4
-0.2
+0.0
+0.8
-0.1
-1.5
phage
Bas48
+0.0
-0.0
+0.2
+0.1
-1.4
phage
Bas58
-0.0
+0.1
+0.4
+0.0
-1.4
phage
Bas51
-0.0
+0.2
+0.3
+0.2
-1.6
no phage control
Control_TnA
-0.4
-0.0
-0.3
+0.1
-0.3
no phage control
Control_TnA
-0.3
-0.0
-0.3
+0.1
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.2
-0.1
-0.0
+0.1
-0.8
phage
Bas06
+0.1
+0.1
+0.1
-0.1
-0.8
phage
Bas51
-0.4
+0.3
+0.5
+0.1
-1.1
phage
Bas50
-0.0
-0.1
+0.2
+0.1
-0.7
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.2
-0.1
-0.3
+0.1
-0.3
phage
Bas48
-0.0
-0.0
+0.4
+0.1
-0.8
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.2
-0.1
-0.2
+0.3
-0.6
no phage control
Control_TnJ
+0.1
+0.2
+0.1
+0.0
-0.7
phage
Bas24
-0.3
+0.1
+0.3
+0.1
-0.3
phage
Ox4
-0.1
-0.0
+0.7
-0.3
-0.5
phage
P2_phage_0.5625_MOI
+0.3
-0.2
-0.1
+0.5
-0.4
lb_plus_sm_buffer
NophageControl
+0.4
-0.2
-0.2
+0.3
-0.1
no phage control
Control_TnD
+0.4
+0.3
+0.1
+0.2
-0.2
phage
EV116
+0.0
-0.0
-0.2
-0.1
+1.7
phage
EV116
+0.4
-0.1
-0.0
-0.3
+1.5
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