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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_04197 and ECD_04198 are separated by 12 nucleotides
ECD_04198 and ECD_04199 overlap by 4 nucleotides
ECD_04199 and ECD_04200 are separated by 249 nucleotides
ECD_04200 and ECD_04201 are separated by 12 nucleotides
ECD_04197: ECD_04197 - isoaspartyl dipeptidase, at 4,467,633 to 4,468,805
_04197
ECD_04198: ECD_04198 - SpmB family inner membrane protein, at 4,468,818 to 4,469,279
_04198
ECD_04199: ECD_04199 - nucleoside recognition pore and gate family putative inner membrane transporter, at 4,469,276 to 4,469,959
_04199
ECD_04200: ECD_04200 - RNA 2'-phosphotransferase, at 4,470,209 to 4,470,763
_04200
ECD_04201: ECD_04201 - DUF1228 family putative inner membrane MFS superfamily transporter, at 4,470,776 to 4,471,954
_04201
Group
Condition
ECD
_04197
ECD
_04198
ECD
_04199
ECD
_04200
ECD
_04201
phage
Bas49
-0.1
-0.8
+0.5
-0.3
-0.3
phage
EV116
-0.1
-0.3
-0.1
-0.3
-0.1
carbon source
Casamino-acids
-0.3
-0.2
-0.2
-0.0
-0.1
phage
Laval1257
-0.4
-0.0
-0.5
+0.3
-0.1
phage
Bas58
-0.3
-0.0
-0.0
-0.4
+0.1
phage
Bas41
-0.3
-0.3
+0.2
-0.3
+0.1
phage
P2_phage_0.5625_MOI
-0.3
-0.4
-0.1
+0.7
-0.2
no phage control
Control_TnA
+0.2
-0.4
-0.2
+0.2
+0.1
phage
Bas32
+0.2
-0.3
+0.2
+0.0
-0.2
phage
EV116
+0.1
+0.5
-0.4
-0.3
+0.0
phage
Bas51
-0.0
-0.2
+0.6
-0.3
-0.1
phage
Bas52
-0.2
-0.2
+0.5
-0.1
-0.1
phage
Laval1259
-0.4
+0.4
+0.1
-0.3
+0.2
phage
Bas48
-0.2
+0.1
+0.3
-0.1
-0.0
phage
N4
+0.1
-0.1
-0.2
+0.1
+0.3
phage
lambda1857_phage_12.5_MOI
-0.3
+0.0
+0.7
-0.1
-0.0
stress
Tailocin 256
+0.1
+0.3
+0.4
-0.5
-0.0
phage
Laval1261
+0.1
+0.3
-0.3
+0.2
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.2
+0.4
-0.0
+0.1
-0.3
lb_plus_sm_buffer
NoPhageControl
-0.1
+0.2
+0.4
-0.1
-0.0
nophagecontrol
NoPhageControl
-0.1
+0.2
-0.1
+0.6
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
+0.4
+0.2
+0.1
-0.2
no phage control
Control_TnJ
-0.0
+0.3
+0.2
+0.2
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.3
+0.5
+0.4
+0.1
-0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.4
+0.5
-0.0
+0.1
-0.0
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.3
+0.5
-0.1
+0.3
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.6
+0.2
+0.2
+0.2
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.4
+0.4
+0.3
+0.3
-0.4
lb_plus_sm_buffer
NophageControl
+0.1
+0.5
+0.4
-0.1
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.4
+0.6
-0.0
+0.2
-0.1
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