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Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_04128 and ECD_04129 are separated by 160 nucleotides
ECD_04129 and ECD_04130 are separated by 77 nucleotides
ECD_04130 and ECD_04131 are separated by 66 nucleotides
ECD_04131 and ECD_04132 are separated by 62 nucleotides
ECD_04128: ECD_04128 - lipopolysaccharide export ABC permease, at 4,398,910 to 4,399,992
_04128
ECD_04129: ECD_04129 - DUF853 family protein with NTPase fold, at 4,400,153 to 4,401,655
_04129
ECD_04130: ECD_04130 - transcriptional repressor, 5-gluconate-binding, at 4,401,733 to 4,402,731
_04130
ECD_04131: ECD_04131 - L-idonate and D-gluconate transporter, at 4,402,798 to 4,404,117
_04131
ECD_04132: ECD_04132 - 5-keto-D-gluconate-5-reductase, at 4,404,180 to 4,404,944
_04132
Group
Condition
ECD
_04128
ECD
_04129
ECD
_04130
ECD
_04131
ECD
_04132
phage
P2_phage_0.5625_MOI
N.D.
-1.1
-1.0
+0.0
-1.0
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
-0.0
-0.6
-0.2
-0.4
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
-0.1
-0.4
-0.1
-0.6
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
-0.1
-0.5
-0.2
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
-0.2
-0.5
-0.1
-0.0
phage
Laval1261
N.D.
-0.2
-0.3
-0.2
-0.0
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
-0.0
-0.4
-0.1
-0.2
phage
Laval1259
N.D.
-0.1
-0.1
+0.0
-0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
+0.3
-0.4
-0.1
-0.4
phage
Ox4
N.D.
-0.2
+0.0
-0.0
-0.4
lb_plus_sm_buffer
NophageControl
N.D.
-0.4
-0.1
-0.1
+0.2
lb_plus_sm_buffer
NoPhageControl
N.D.
-0.3
-0.2
+0.1
-0.0
phage
Bas06
N.D.
+0.2
+0.1
-0.1
-0.5
nophagecontrol
NoPhageControl
N.D.
-0.3
-0.1
-0.0
+0.3
phage
Ste04
N.D.
-0.6
+0.2
+0.1
+0.1
phage
Bas33
N.D.
-0.2
+0.2
+0.1
-0.2
phage
EV152
N.D.
-0.1
-0.3
+0.1
+0.2
phage
Bas52
N.D.
+0.2
-0.4
+0.2
+0.0
phage
Bas41
N.D.
-0.0
-0.3
-0.0
+0.4
phage
Bas27
N.D.
+0.3
+0.2
-0.2
-0.1
phage
EV116
N.D.
+0.3
-0.4
+0.1
+0.2
phage
JK16
N.D.
+0.4
-0.3
+0.1
+0.0
phage
Bas14
N.D.
-0.1
+0.3
+0.1
+0.2
phage
Bas18
N.D.
+0.3
+0.1
-0.1
+0.2
phage
Bas69
N.D.
+0.0
-0.1
+0.1
+0.5
phage
Bas50
N.D.
+0.1
+0.3
+0.2
-0.0
phage
Laval1374
N.D.
+0.3
-0.1
+0.1
+0.5
no phage control
Control_TnD
N.D.
+0.3
+0.2
-0.0
+0.5
phage
EV116
N.D.
+0.2
+0.4
+0.1
+0.2
phage
Bas52
N.D.
+0.4
-0.2
+0.2
+0.7
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