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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_04098 and ECD_04099 overlap by 14 nucleotides
ECD_04099 and ECD_04100 are separated by 32 nucleotides
ECD_04100 and ECD_04101 are separated by 175 nucleotides
ECD_04101 and ECD_04102 are separated by 155 nucleotides
ECD_04098: ECD_04098 - putative sugar ABC transporter permease, at 4,364,189 to 4,365,211
_04098
ECD_04099: ECD_04099 - putative sugar ABC transporter permease, at 4,365,198 to 4,366,193
_04099
ECD_04100: ECD_04100 - fructose-1,6-bisphosphatase I, at 4,366,226 to 4,367,224
_04100
ECD_04101: ECD_04101 - UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase, at 4,367,400 to 4,368,773
_04101
ECD_04102: ECD_04102 - ribosome-associated UPF0307 family protein, at 4,368,929 to 4,369,480
_04102
Group
Condition
ECD
_04098
ECD
_04099
ECD
_04100
ECD
_04101
ECD
_04102
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.3
-0.5
-1.8
+0.1
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.2
-0.5
-1.4
+0.1
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.2
-0.6
-1.6
+0.1
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.4
-0.6
-1.2
+0.2
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.2
-0.4
-1.5
+0.1
+0.3
no phage control
Control_TnJ
+0.0
-0.1
-0.5
-0.1
-1.1
phage
Bas26
+0.1
-0.0
-1.1
+0.1
-0.7
phage
Bas30
-0.2
-0.2
-0.4
-0.3
-0.5
balo
Mixed culture, Halobacteriovorax-1
-0.2
-0.1
-0.5
-0.3
-0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.3
-0.3
-1.3
+0.2
+0.1
phage
Bas06
-0.2
-0.2
-0.3
+0.1
-1.0
phage
Bas28
-0.4
-0.3
-0.0
+0.0
-0.8
no phage control
Control_TnA
-0.3
+0.0
-0.6
-0.0
-0.5
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.2
-0.4
-1.4
+0.1
+0.4
phage
Ox4
-0.1
-0.2
-0.1
-0.2
-0.9
phage
Laval1261
-0.2
-0.1
-0.6
-0.1
-0.5
phage
P2_phage_0.5625_MOI
+0.0
-0.3
-0.6
-0.3
-0.2
phage
Bas29
-0.1
-0.1
-0.5
-0.1
-0.7
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.3
-0.5
-0.8
+0.3
+0.0
phage
Bas34
-0.1
-0.1
-0.3
-0.1
-0.7
phage
EV152
-0.2
+0.2
+0.1
-0.1
-1.1
phage
Bas69
-0.2
+0.1
-0.2
-0.0
-0.8
phage
Bas18
+0.1
-0.0
+0.2
-0.2
-0.7
lb_plus_sm_buffer
NophageControl
+0.4
-0.1
-0.3
-0.1
-0.5
phage
EV152
-0.1
-0.0
+0.4
-0.1
-0.6
phage
lambda1857_phage_12.5_MOI
-1.1
+0.2
+0.4
-0.0
+0.2
phage
Bas31
+0.2
-0.0
-0.4
+0.3
-0.5
phage
Bas51
-0.3
-0.1
+0.4
-0.2
+0.6
lb_plus_sm_buffer
NoPhageControl
+0.3
+0.2
+0.9
-0.1
-0.4
phage
CM1
-0.2
+0.1
+0.8
+0.1
+0.2
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