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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_04036 and ECD_04037 are separated by 9 nucleotides
ECD_04037 and ECD_04038 overlap by 8 nucleotides
ECD_04038 and ECD_04039 are separated by 85 nucleotides
ECD_04039 and ECD_04040 are separated by 75 nucleotides
ECD_04036: ECD_04036 - N-acetylmuramoyl-l-alanine amidase II, at 4,302,585 to 4,303,922
_04036
ECD_04037: ECD_04037 - methyl-directed mismatch repair protein, at 4,303,932 to 4,305,779
_04037
ECD_04038: ECD_04038 - delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase, at 4,305,772 to 4,306,722
_04038
ECD_04039: ECD_04039 - global sRNA chaperone; HF-I, host factor for RNA phage Q beta replication, at 4,306,808 to 4,307,116
_04039
ECD_04040: ECD_04040 - GTPase, stimulated by 50S subunit binding; Mn(2+) homeostasis regulator, at 4,307,192 to 4,308,472
_04040
Group
Condition
ECD
_04036
ECD
_04037
ECD
_04038
ECD
_04039
ECD
_04040
phage
Bas14
-0.0
-0.0
-4.0
-0.1
-0.3
phage
Bas06
+0.1
+0.0
-4.0
-0.3
-0.1
no phage control
Control_TnA
-0.2
-0.0
-3.3
-0.5
+0.1
phage
Bas30
-0.0
-0.2
-3.2
-0.4
-0.1
phage
Bas50
-0.1
-0.3
-3.0
-0.8
+0.5
phage
Bas34
+0.0
+0.0
-3.7
-0.1
-0.0
phage
P2_phage_0.5625_MOI
+0.0
-0.2
-4.4
+0.4
+0.5
phage
Laval1261
-0.4
-0.2
-2.0
-0.7
-0.3
phage
Bas26
+0.0
-0.3
-2.8
-0.0
-0.2
phage
HSDP3
-0.0
+0.2
-2.9
-0.1
-0.5
phage
Bas32
+0.0
-0.0
-2.9
-0.1
-0.2
phage
EV152
-0.2
+0.0
-2.1
-0.6
-0.3
phage
Laval1267
+0.0
-0.1
-2.0
-0.5
-0.6
phage
CBA120
+0.0
+0.1
-2.9
+0.0
-0.3
nophagecontrol
NoPhageControl
-0.0
+0.4
-3.4
-0.1
+0.1
phage
Laval1259
-0.1
-0.0
-2.0
-1.2
+0.4
phage
Bas14
-0.0
-0.0
-2.9
-0.2
+0.1
phage
Bas26
+0.1
+0.1
-2.8
-0.0
-0.4
phage
Bas31
+0.2
-0.0
-3.0
-0.3
+0.2
no phage control
Control_TnN
+0.0
+0.0
-2.8
-0.1
+0.0
phage
EV152
-0.1
+0.0
-2.4
-0.3
-0.1
phage
Bas50
-0.2
+0.1
-1.4
-1.2
+0.1
phage
Bas24
-0.3
+0.0
-2.8
+0.1
+0.3
phage
Bas28
+0.2
+0.1
-2.4
-0.2
-0.3
lb_plus_sm_buffer
NophageControl
+0.2
+0.0
-2.5
-0.1
+0.1
phage
Bas06
+0.2
+0.2
-2.5
-0.0
-0.3
phage
Ox4
-0.2
-0.1
-2.2
+0.6
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.1
+0.2
-1.7
+0.4
+0.6
phage
Bas52
-0.3
+0.1
+1.1
-1.0
+0.4
phage
Laval1257
-0.6
+0.3
+2.6
+0.2
-0.1
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