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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_03957 and ECD_03958 are separated by 10 nucleotides
ECD_03958 and ECD_03959 overlap by 22 nucleotides
ECD_03959 and ECD_03960 are separated by 126 nucleotides
ECD_03960 and ECD_03961 are separated by 58 nucleotides
ECD_03957: ECD_03957 - allulose-6-phosphate 3-epimerase, at 4,214,970 to 4,215,665
_03957
ECD_03958: ECD_03958 - D-allose ABC transporter permease, at 4,215,676 to 4,216,656
_03958
ECD_03959: ECD_03959 - D-allose ABC transporter ATPase, at 4,216,635 to 4,218,167
_03959
ECD_03960: ECD_03960 - D-allose ABC transporter periplasmic binding protein, at 4,218,294 to 4,219,229
_03960
ECD_03961: ECD_03961 - d-allose-inducible als operon transcriptional repressor; autorepressor; repressor of rpiR, at 4,219,288 to 4,220,178
_03961
Group
Condition
ECD
_03957
ECD
_03958
ECD
_03959
ECD
_03960
ECD
_03961
phage
lambda1857_phage_12.5_MOI
+0.1
+0.2
-0.2
-0.5
-0.4
phage
Laval1261
-0.2
-0.3
-0.1
+0.3
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.0
-0.0
-0.3
-0.8
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.1
-0.1
-0.3
-0.8
+0.5
phage
Laval1257
-0.4
+0.1
-0.1
+0.1
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.0
-0.1
-0.4
-0.4
+0.4
phage
Bas50
-0.0
+0.1
+0.3
-0.7
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.1
+0.1
-0.4
-0.6
+0.5
phage
EV152
-0.1
-0.3
-0.1
+0.2
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.0
-0.1
-0.4
-0.2
+0.7
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.1
+0.1
-0.4
-0.4
+0.7
phage
HSDP3
+0.3
+0.2
-0.0
-0.3
-0.1
phage
Bas48
-0.1
+0.0
-0.0
-0.4
+0.5
phage
Laval1374
+0.3
-0.1
-0.0
-0.2
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.1
-0.1
-0.3
-0.2
+0.6
phage
Bas52
+0.2
-0.2
+0.1
-0.2
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.1
-0.0
-0.3
-0.2
+0.6
nophagecontrol
NoPhageControl
+0.4
-0.1
-0.3
+0.0
+0.3
phage
Ox4
+0.5
-0.1
+0.1
-0.3
+0.2
phage
Bas51
+0.2
+0.2
+0.0
-0.2
+0.2
no phage control
Control_TnN
-0.0
-0.0
+0.1
+0.6
-0.1
phage
CM1
-0.1
+0.2
+0.4
-0.0
+0.2
phage
Bas52
+0.1
+0.0
+0.2
-0.1
+0.5
phage
Laval1259
-0.2
+0.2
+0.2
+0.4
+0.1
phage
EV116
-0.1
-0.0
-0.1
+0.6
+0.4
phage
EV152
+0.1
+0.1
+0.0
+0.6
-0.0
phage
Ox4
+0.5
+0.0
+0.2
-0.1
+0.3
phage
EV116
+0.5
-0.0
+0.2
-0.1
+0.4
phage
Bas51
+0.1
-0.1
+0.2
+0.3
+0.5
phage
Laval1267
+0.2
-0.1
+0.1
+0.8
+0.1
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