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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_03788 and ECD_03789 are separated by 174 nucleotides
ECD_03789 and ECD_03790 overlap by 4 nucleotides
ECD_03790 and ECD_03791 are separated by 287 nucleotides
ECD_03791 and ECD_03792 overlap by 17 nucleotides
ECD_03788: ECD_03788 - rhamnulose-1-phosphate aldolase, at 4,001,646 to 4,002,470
_03788
ECD_03789: ECD_03789 - L-rhamnose isomerase, at 4,002,645 to 4,003,904
_03789
ECD_03790: ECD_03790 - rhamnulokinase, at 4,003,901 to 4,005,370
_03790
ECD_03791: ECD_03791 - transcriptional activator of rhaBAD and rhaT, at 4,005,658 to 4,006,494
_03791
ECD_03792: ECD_03792 - transcriptional activator of rhaSR, at 4,006,478 to 4,007,416
_03792
Group
Condition
ECD
_03788
ECD
_03789
ECD
_03790
ECD
_03791
ECD
_03792
phage
lambda1857_phage_12.5_MOI
-0.2
-0.2
-0.4
-0.6
-0.4
phage
Laval1261
-0.0
+0.1
-0.0
-0.5
-0.0
phage
N4
+0.2
-0.1
-0.1
-0.2
-0.1
no phage control
Control_TnN
-0.1
-0.1
-0.1
+0.2
-0.1
phage
Bas51
-0.2
-0.1
-0.2
-0.1
+0.4
phage
Laval1259
-0.0
-0.2
-0.2
+0.1
+0.1
phage
Bas29
-0.0
+0.3
-0.2
+0.0
-0.1
phage
Bas06
+0.0
+0.1
-0.1
-0.2
+0.2
no phage control
Control_TnA
+0.0
-0.1
+0.1
+0.2
-0.2
phage
Laval1257
+0.3
-0.3
-0.4
+0.2
+0.3
phage
Bas58
-0.1
-0.1
+0.1
-0.2
+0.2
phage
Bas52
-0.2
-0.0
-0.1
+0.1
+0.3
phage
CM1
-0.3
-0.1
+0.0
-0.1
+0.5
no phage control
Control_TnJ
+0.0
+0.1
-0.1
+0.2
-0.2
lb_plus_sm_buffer
NoPhageControl
+0.1
-0.1
-0.1
+0.3
-0.1
nophagecontrol
NoPhageControl
+0.1
-0.4
+0.1
+0.3
+0.2
phage
Bas48
-0.1
+0.1
-0.1
+0.1
+0.2
phage
EV152
+0.2
-0.2
+0.2
+0.1
-0.0
phage
Bas52
-0.1
+0.0
-0.1
-0.0
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.1
-0.1
+0.1
+0.1
+0.2
phage
Bas51
-0.1
+0.1
-0.0
-0.0
+0.5
phage
EV116
+0.4
-0.1
+0.1
+0.2
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.3
+0.1
+0.0
+0.1
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.2
+0.1
-0.0
+0.1
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.2
+0.1
+0.1
+0.2
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
+0.1
+0.1
+0.1
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.3
+0.0
+0.1
+0.2
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.2
+0.1
+0.0
+0.2
+0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.3
+0.1
+0.2
+0.2
+0.3
phage
P2_phage_0.5625_MOI
+0.2
+0.2
+0.2
-0.1
+0.7
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