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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_03355 and ECD_03356 are separated by 41 nucleotides
ECD_03356 and ECD_03357 are separated by 63 nucleotides
ECD_03357 and ECD_03358 are separated by 115 nucleotides
ECD_03358 and ECD_03359 are separated by 254 nucleotides
ECD_03355: ECD_03355 - Putative LuxR family repressor for dicarboxylate transport, at 3,515,870 to 3,516,400
_03355
ECD_03356: ECD_03356 - putative Mg(2+) transport ATPase, inner membrane protein, at 3,516,442 to 3,517,089
_03356
ECD_03357: ECD_03357 - acid-resistance protein, at 3,517,153 to 3,517,479
_03357
ECD_03358: ECD_03358 - stress response protein acid-resistance protein, at 3,517,595 to 3,517,927
_03358
ECD_03359: ECD_03359 - acid-resistance membrane protein, at 3,518,182 to 3,518,754
_03359
Group
Condition
ECD
_03355
ECD
_03356
ECD
_03357
ECD
_03358
ECD
_03359
phage
Bas27
-4.4
-0.5
+0.1
-0.7
-0.0
phage
P2_phage_0.5625_MOI
-2.5
-0.3
-0.2
-0.4
-1.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-2.1
-0.4
-0.6
-2.3
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-1.5
-0.9
-0.9
-0.9
+0.4
phage
Bas29
+0.7
+0.1
+0.4
-4.1
-0.7
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.4
-0.6
-0.8
-1.4
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.0
-0.6
-1.3
-1.2
+0.3
no phage control
Control_TnA
-0.4
-0.4
-0.4
-0.8
-0.7
lb_plus_sm_buffer
NoPhageControl
-0.4
-0.0
-1.2
-0.5
-0.6
no phage control
Control_TnN
-1.4
-0.1
+0.3
-0.3
-0.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-1.5
-0.7
-0.8
+0.7
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.9
-0.6
-0.7
-0.3
+0.8
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.7
-0.5
-0.8
-0.2
+0.6
phage
EV152
-0.1
+0.1
+0.4
-1.9
-0.1
lb_plus_sm_buffer
NophageControl
-0.7
-0.6
+1.2
-0.4
-0.2
balo
Mixed culture, Halobacteriovorax-1
-1.4
-0.3
-0.2
+0.8
+0.5
phage
JK16
-1.7
-0.0
+0.1
+1.1
-0.1
no phage control
Control_TnA
-1.6
+0.1
+0.6
+0.7
-0.4
nophagecontrol
NoPhageControl
+1.3
-0.6
-1.0
-0.8
+1.0
phage
Bas58
+1.2
-0.2
+0.2
-1.2
-0.1
phage
EV116
-0.1
+0.1
+1.2
-1.2
+0.2
phage
Bas51
-0.5
-0.1
+1.0
-0.4
+0.6
phage
Laval1261
+1.2
+0.0
+0.9
-0.5
-0.6
phage
lambda1857_phage_12.5_MOI
+0.8
+0.4
+1.7
-0.5
-0.9
phage
Bas48
+1.1
+0.2
-0.7
+0.9
+0.1
phage
Laval1374
+1.1
-0.5
+0.5
+0.5
+0.2
phage
Bas50
-0.5
+0.2
+1.1
+1.4
-0.4
phage
Bas52
+1.5
-0.2
+0.7
+0.1
+0.3
balo
Mixed culture, Halobacteriovorax-1
+0.2
+0.3
+0.1
+1.3
+0.7
phage
Laval1257
+0.4
+1.5
+1.0
+0.8
+0.7
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