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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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500 nt
ECD_03064 and ECD_03065 overlap by 32 nucleotides
ECD_03065 and ECD_03066 are separated by 6 nucleotides
ECD_03066 and ECD_03067 are separated by 47 nucleotides
ECD_03067 and ECD_03068 are separated by 22 nucleotides
ECD_03064: ECD_03064 - periplasmic membrane-anchored LPS-binding protein; LPS export protein, at 3,211,336 to 3,211,911
_03064
ECD_03065: ECD_03065 - lipopolysaccharide export ABC transporter periplasmic binding protein; Lipid A binding protein; LPS export and assembly protein, at 3,211,880 to 3,212,437
_03065
ECD_03066: ECD_03066 - lipopolysaccharide export ABC transporter ATPase, at 3,212,444 to 3,213,169
_03066
ECD_03067: ECD_03067 - RNA polymerase, sigma 54 (sigma N) factor, at 3,213,217 to 3,214,650
_03067
ECD_03068: ECD_03068 - ribosome hibernation promoting factor HPF; stabilizes 100S dimers, at 3,214,673 to 3,214,960
_03068
Group
Condition
ECD
_03064
ECD
_03065
ECD
_03066
ECD
_03067
ECD
_03068
phage
lambda1857_phage_12.5_MOI
-2.6
N.D.
N.D.
-1.8
-0.7
lb_plus_sm_buffer
NophageControl
-1.6
N.D.
N.D.
-2.1
-0.3
balo
Mixed culture, Halobacteriovorax-10
-1.5
N.D.
N.D.
-2.0
-0.2
lb_plus_sm_buffer
NophageControl
-0.3
N.D.
N.D.
-3.1
-0.2
nophagecontrol
NoPhageControl
+0.2
N.D.
N.D.
-4.7
+1.0
no phage control
Control_TnA
-0.2
N.D.
N.D.
-3.1
-0.1
phage
Laval1261
-1.4
N.D.
N.D.
-1.8
-0.1
phage
P2_phage_0.5625_MOI
-0.4
N.D.
N.D.
-3.2
+0.4
phage
Bas24
-0.4
N.D.
N.D.
-1.9
-0.3
balo
Mixed culture, Halobacteriovorax-10
-0.4
N.D.
N.D.
-2.0
-0.1
phage
Bas50
-1.6
N.D.
N.D.
-1.3
+0.4
balo
Mixed culture, Halobacteriovorax-1
-0.2
N.D.
N.D.
-2.2
+0.0
no phage control
Control_TnN
-0.3
N.D.
N.D.
-2.0
+0.1
phage
Bas32
+0.4
N.D.
N.D.
-2.1
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.0
N.D.
N.D.
-2.5
+0.7
phage
JK16
+0.7
N.D.
N.D.
-1.9
-0.1
lb_plus_sm_buffer
NophageControl
+0.4
N.D.
N.D.
-2.0
+0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
N.D.
N.D.
-1.9
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.7
N.D.
N.D.
-1.8
+0.3
carbon source
L-Arabinose
+2.1
N.D.
N.D.
-2.6
+0.2
carbon source
L-Arabinose
+3.3
N.D.
N.D.
-2.0
+0.0
phage
Bas52
+0.7
N.D.
N.D.
+1.2
+0.6
phage
Bas49
+2.0
N.D.
N.D.
+0.9
+0.1
phage
Bas51
+1.3
N.D.
N.D.
+0.9
+1.1
phage
CM1
+1.3
N.D.
N.D.
+0.7
+1.4
phage
Bas52
+0.9
N.D.
N.D.
+1.6
+1.0
phage
Bas51
+1.4
N.D.
N.D.
+1.6
+1.0
phage
EV116
+2.1
N.D.
N.D.
+3.2
-0.3
phage
EV116
+2.5
N.D.
N.D.
+3.0
-0.1
stress
Tailocin 256
+4.9
N.D.
N.D.
+4.2
-1.1
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