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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_03062 and ECD_03063 are separated by 20 nucleotides
ECD_03063 and ECD_03064 overlap by 4 nucleotides
ECD_03064 and ECD_03065 overlap by 32 nucleotides
ECD_03065 and ECD_03066 are separated by 6 nucleotides
ECD_03062: ECD_03062 - D-arabinose 5-phosphate isomerase, at 3,209,766 to 3,210,752
_03062
ECD_03063: ECD_03063 - 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, at 3,210,773 to 3,211,339
_03063
ECD_03064: ECD_03064 - periplasmic membrane-anchored LPS-binding protein; LPS export protein, at 3,211,336 to 3,211,911
_03064
ECD_03065: ECD_03065 - lipopolysaccharide export ABC transporter periplasmic binding protein; Lipid A binding protein; LPS export and assembly protein, at 3,211,880 to 3,212,437
_03065
ECD_03066: ECD_03066 - lipopolysaccharide export ABC transporter ATPase, at 3,212,444 to 3,213,169
_03066
Group
Condition
ECD
_03062
ECD
_03063
ECD
_03064
ECD
_03065
ECD
_03066
phage
Laval1261
-0.4
-0.6
-1.4
N.D.
N.D.
lb_plus_sm_buffer
NophageControl
-0.0
-0.6
-1.6
N.D.
N.D.
phage
Bas50
-0.1
-0.5
-1.6
N.D.
N.D.
balo
Mixed culture, Halobacteriovorax-10
-0.1
-0.2
-1.5
N.D.
N.D.
phage
Bas48
+0.0
-0.6
-0.8
N.D.
N.D.
phage
Bas31
-0.4
-0.5
-0.3
N.D.
N.D.
phage
N4
-0.2
-0.5
-0.6
N.D.
N.D.
phage
Laval1267
+0.0
-0.7
-0.6
N.D.
N.D.
no phage control
Control_TnA
-0.2
-0.8
-0.2
N.D.
N.D.
phage
Bas06
-0.1
-0.3
-0.8
N.D.
N.D.
phage
Bas27
-0.0
-0.4
-0.9
N.D.
N.D.
phage
Ox4
-0.1
-1.1
+0.1
N.D.
N.D.
phage
Bas14
+0.1
+0.4
-1.2
N.D.
N.D.
phage
lambda1857_phage_12.5_MOI
-0.2
+2.2
-2.6
N.D.
N.D.
phage
Ox4
+0.1
-0.9
+0.4
N.D.
N.D.
phage
Bas52
+0.1
-0.7
+0.7
N.D.
N.D.
phage
P2_phage_0.5625_MOI
-0.1
+0.8
-0.4
N.D.
N.D.
phage
Bas51
+0.1
-0.7
+1.4
N.D.
N.D.
phage
Bas52
+0.3
-0.1
+0.9
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.5
+0.3
+0.4
N.D.
N.D.
phage
Bas24
-0.1
+1.7
-0.4
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.5
+0.5
+0.3
N.D.
N.D.
phage
Laval1257
-0.1
+1.3
+0.1
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.4
+0.3
+0.7
N.D.
N.D.
phage
CM1
+0.6
-0.4
+1.3
N.D.
N.D.
nophagecontrol
NoPhageControl
+0.6
+0.7
+0.2
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.5
+0.3
+0.8
N.D.
N.D.
phage
Bas51
+0.2
+0.1
+1.3
N.D.
N.D.
phage
EV116
+0.3
+1.4
+2.1
N.D.
N.D.
phage
EV116
+0.7
+2.0
+2.6
N.D.
N.D.
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