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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_02980 and ECD_02981 are separated by 13 nucleotides
ECD_02981 and ECD_02982 are separated by 33 nucleotides
ECD_02982 and ECD_02983 are separated by 25 nucleotides
ECD_02983 and ECD_02984 are separated by 21 nucleotides
ECD_02980: ECD_02980 - putative reactive intermediate deaminase, at 3,126,020 to 3,126,409
_02980
ECD_02981: ECD_02981 - pyruvate formate-lyase 4/2-ketobutyrate formate-lyase, at 3,126,423 to 3,128,717
_02981
ECD_02982: ECD_02982 - propionate kinase/acetate kinase C, anaerobic, at 3,128,751 to 3,129,959
_02982
ECD_02983: ECD_02983 - L-threonine/L-serine transporter, at 3,129,985 to 3,131,316
_02983
ECD_02984: ECD_02984 - L-threonine dehydratase, catabolic, at 3,131,338 to 3,132,327
_02984
Group
Condition
ECD
_02980
ECD
_02981
ECD
_02982
ECD
_02983
ECD
_02984
no phage control
Control_TnA
-0.1
-0.0
-0.5
+0.1
-0.9
phage
Bas06
+0.4
-0.1
+0.1
-0.4
-1.1
phage
Bas24
+0.2
-0.2
+0.3
+0.0
-1.3
carbon source
Casamino-acids
-0.2
-0.2
-0.2
+0.1
-0.4
phage
EV152
-0.2
+0.2
-0.3
-0.1
-0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
+0.0
-0.6
-0.3
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.4
-0.1
-0.9
-0.2
+0.0
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.6
+0.1
-1.1
+0.0
-0.3
carbon source
L-Arabinose
-0.7
+0.0
-0.2
+0.2
+0.1
phage
P2_phage_0.5625_MOI
+1.0
-0.5
-0.9
+0.3
-0.4
phage
Bas30
-0.1
-0.1
+0.2
+0.2
-0.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.3
+0.2
-0.7
-0.0
-0.0
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.5
+0.0
-0.7
-0.0
-0.1
phage
EV116
+0.5
+0.0
-0.0
-0.2
-0.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.5
+0.0
-0.6
-0.1
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.4
-0.0
-0.8
-0.1
+0.1
phage
Bas49
-1.0
-0.6
+0.1
+0.3
+1.0
carbon source
L-Arabinose
-0.4
+0.0
-0.0
+0.2
+0.6
phage
Bas52
-0.5
-0.3
-0.1
+0.2
+1.5
phage
Bas58
-0.0
-0.1
-0.0
+0.0
+1.1
carbon source
D-Glucose
+0.1
+0.1
-0.2
+0.3
+0.6
phage
Bas52
-0.5
-0.0
+0.1
+0.2
+1.3
nophagecontrol
NoPhageControl
+0.4
+0.2
-0.4
-0.2
+1.2
phage
Bas51
-0.6
-0.2
+0.1
+0.4
+1.8
phage
Bas51
-0.5
-0.2
+0.0
+0.3
+2.1
phage
CM1
-0.5
-0.1
-0.1
+0.0
+2.4
phage
Ox4
+0.3
-0.0
+0.1
+0.2
+1.7
phage
Ox4
+0.1
-0.1
+0.2
+0.4
+1.7
phage
Laval1257
+1.0
+0.2
+0.5
+0.5
+0.2
stress
Tailocin 256
-0.5
-0.2
+0.3
+1.1
+3.4
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