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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_02952 and ECD_02953 are separated by 283 nucleotides
ECD_02953 and ECD_02954 are separated by 84 nucleotides
ECD_02954 and ECD_02955 are separated by 76 nucleotides
ECD_02955 and ECD_02956 are separated by 78 nucleotides
ECD_02952: ECD_02952 - mRNA interferase toxin of the HigB-HigA toxin-antitoxin system, at 3,100,223 to 3,100,537
_02952
ECD_02953: ECD_02953 - 23S rRNA m(2)G1835 methyltransferase, SAM-dependent, at 3,100,821 to 3,101,957
_02953
ECD_02954: ECD_02954 - putative metal dependent hydrolase, at 3,102,042 to 3,102,545
_02954
ECD_02955: ECD_02955 - DUF218 superfamily protein, at 3,102,622 to 3,103,314
_02955
ECD_02956: ECD_02956 - putative NAD(P)-dependent dehydrogenase, at 3,103,393 to 3,104,379
_02956
Group
Condition
ECD
_02952
ECD
_02953
ECD
_02954
ECD
_02955
ECD
_02956
phage
Bas50
-0.1
-0.3
-0.4
-0.2
-0.3
phage
Bas52
-0.1
-0.1
-0.6
-0.1
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.6
-0.3
-0.3
-0.3
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.5
-0.2
-0.1
-0.4
+0.0
phage
Bas50
-0.3
-0.4
-0.2
+0.0
-0.1
phage
Bas51
-0.3
+0.1
-0.2
-0.2
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.6
-0.1
-0.4
-0.2
+0.2
lb_plus_sm_buffer
NophageControl
-0.0
-0.1
-0.4
-0.2
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.4
-0.2
-0.2
-0.2
+0.1
no phage control
Control_TnA
-0.3
+0.0
-0.2
-0.1
-0.2
phage
Laval1259
-0.1
-0.1
-0.2
+0.2
-0.3
phage
Bas52
-0.1
+0.1
-0.1
-0.1
-0.4
balo
Mixed culture, Halobacteriovorax-1
-0.3
-0.1
-0.3
-0.0
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.4
-0.1
-0.2
-0.1
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.4
-0.1
-0.1
-0.2
+0.1
no phage control
Control_TnJ
-0.5
-0.0
+0.2
-0.1
-0.2
phage
Ste04
-0.2
+0.0
-0.3
-0.3
+0.2
phage
Bas51
-0.1
+0.1
-0.2
+0.1
-0.2
nophagecontrol
NoPhageControl
-0.1
+0.3
-0.2
-0.1
-0.2
phage
Laval1257
+0.3
-0.3
-0.7
+0.1
+0.4
phage
Bas26
+0.2
-0.0
+0.1
-0.4
-0.0
phage
K25
+0.1
-0.1
+0.2
-0.3
-0.1
phage
CM1
+0.1
+0.2
-0.2
+0.2
-0.3
phage
P2_phage_0.5625_MOI
-0.2
+0.2
+0.3
-0.6
+0.3
phage
Laval1263
+0.3
-0.1
+0.2
+0.0
-0.2
phage
EV116
+0.6
-0.2
-0.2
-0.0
+0.1
phage
Ox4
+0.2
+0.5
-0.3
+0.1
-0.1
phage
Bas34
+0.1
+0.0
+0.3
+0.1
+0.2
phage
EV116
+0.1
+0.3
+0.3
-0.0
+0.2
phage
Ox4
+0.4
+0.3
+0.3
+0.0
-0.1
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