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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_02405 and ECD_02406 are separated by 17 nucleotides
ECD_02406 and ECD_02407 are separated by 110 nucleotides
ECD_02407 and ECD_02408 are separated by 26 nucleotides
ECD_02408 and ECD_02409 are separated by 284 nucleotides
ECD_02405: ECD_02405 - ancillary SecYEG translocon subunit; putative anti-RcsB factor, at 2,503,143 to 2,503,763
_02405
ECD_02406: ECD_02406 - histidyl tRNA synthetase, at 2,503,781 to 2,505,055
_02406
ECD_02407: ECD_02407 - 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase, at 2,505,166 to 2,506,284
_02407
ECD_02408: ECD_02408 - MreB assembly cytoskeletal protein, at 2,506,311 to 2,507,324
_02408
ECD_02409: ECD_02409 - dual specificity 23S rRNA m(2)A2503, tRNA m(2)A37 methyltransferase, SAM-dependent, at 2,507,609 to 2,508,763
_02409
Group
Condition
ECD
_02405
ECD
_02406
ECD
_02407
ECD
_02408
ECD
_02409
phage
EV116
-0.8
N.D.
N.D.
-0.8
-1.3
phage
Ox4
-1.4
N.D.
N.D.
+0.0
-0.8
phage
Bas52
-0.3
N.D.
N.D.
-0.0
-1.8
phage
Bas51
-0.4
N.D.
N.D.
+0.2
-1.9
phage
EV116
-0.1
N.D.
N.D.
-0.5
-1.4
phage
Laval1257
-0.3
N.D.
N.D.
-1.2
-0.3
phage
lambda1857_phage_12.5_MOI
-0.4
N.D.
N.D.
-0.6
-0.8
phage
Bas51
-0.2
N.D.
N.D.
+0.3
-1.8
phage
Bas52
-0.0
N.D.
N.D.
-0.0
-1.6
phage
CM1
-0.3
N.D.
N.D.
+0.7
-2.0
phage
Ox4
-1.1
N.D.
N.D.
+0.4
-0.7
phage
EV152
-0.1
N.D.
N.D.
-0.8
-0.3
phage
Bas48
+0.0
N.D.
N.D.
-0.3
-0.9
phage
Bas58
-0.1
N.D.
N.D.
+0.2
-1.2
phage
Bas48
-0.2
N.D.
N.D.
+0.1
-0.8
phage
Laval1259
-0.2
N.D.
N.D.
+0.3
-1.0
no phage control
Control_TnD
-0.2
N.D.
N.D.
-0.5
-0.1
phage
EV152
-0.3
N.D.
N.D.
+0.2
-0.4
phage
Bas24
+0.5
N.D.
N.D.
-0.2
-0.7
phage
Bas50
+0.5
N.D.
N.D.
+0.3
-0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.5
N.D.
N.D.
+0.4
+0.9
phage
P2_phage_0.5625_MOI
-0.7
N.D.
N.D.
+1.1
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.2
N.D.
N.D.
+0.6
+0.8
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.1
N.D.
N.D.
+0.6
+0.9
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.0
N.D.
N.D.
+0.5
+0.9
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.1
N.D.
N.D.
+0.8
+0.8
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.1
N.D.
N.D.
+0.7
+1.0
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
N.D.
N.D.
+0.5
+0.9
nophagecontrol
NoPhageControl
+0.6
N.D.
N.D.
+1.1
+0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.3
N.D.
N.D.
+1.0
+1.2
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