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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_02167 and ECD_02168 overlap by 11 nucleotides
ECD_02168 and ECD_02169 overlap by 4 nucleotides
ECD_02169 and ECD_02170 are separated by 192 nucleotides
ECD_02170 and ECD_02171 are separated by 40 nucleotides
ECD_02167: ECD_02167 - anaerobic sn-glycerol-3-phosphate dehydrogenase, large FAD/NAD(P)-binding subunit, at 2,243,016 to 2,244,644
_02167
ECD_02168: ECD_02168 - anaerobic sn-glycerol-3-phosphate dehydrogenase membrane anchor subunit, at 2,244,634 to 2,245,893
_02168
ECD_02169: ECD_02169 - anaerobic sn-glycerol-3-phosphate dehydrogenase, C subunit, 4Fe-4S iron-sulfur cluster, at 2,245,890 to 2,247,080
_02169
ECD_02170: ECD_02170 - transposase_31 family protein, at 2,247,273 to 2,248,175
_02170
ECD_02171: ECD_02171 - 2-keto-3-deoxy-L-rhamnonate aldolase, at 2,248,216 to 2,249,019
_02171
Group
Condition
ECD
_02167
ECD
_02168
ECD
_02169
ECD
_02170
ECD
_02171
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.1
-1.1
-1.3
-0.8
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.1
-0.5
-1.6
-1.1
+0.4
phage
Bas34
-0.0
-0.3
+0.0
-1.3
-1.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.8
-0.8
-1.0
-0.5
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.0
-1.1
-1.0
-0.7
+0.7
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.3
-0.1
-0.7
-0.9
+0.4
nophagecontrol
NoPhageControl
+0.2
+0.1
-2.2
+0.1
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.3
-0.4
+0.1
-1.1
+0.4
no phage control
Control_TnN
-0.1
+0.1
-0.9
-0.1
-0.3
phage
EV116
+0.4
-0.0
-0.7
-0.2
-0.5
phage
Bas50
-0.6
+0.5
+0.2
-0.2
-0.9
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.3
-0.3
-0.7
-0.0
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.0
-0.2
-0.5
-0.7
+0.6
lb_plus_sm_buffer
NophageControl
+0.5
-0.7
-0.2
+0.1
-0.5
phage
K25
+0.1
-0.7
-0.4
+0.2
+0.1
phage
Bas32
+0.1
+0.1
+0.1
+0.1
-1.0
phage
Bas51
-0.0
+0.2
-0.3
+0.3
-0.6
no phage control
Control_TnH
+0.2
+0.3
-0.4
+0.3
-0.7
phage
HSDP3
+0.4
-0.3
+0.1
+0.3
-0.5
phage
P2_phage_0.5625_MOI
+0.6
-0.2
-0.1
-1.2
+0.9
phage
CM1
-0.7
-0.2
+0.5
+0.5
-0.0
phage
lambda1857_phage_12.5_MOI
-0.2
-0.2
+0.2
-0.4
+0.7
phage
EV152
+0.2
+0.7
-0.6
-0.0
+0.1
no phage control
Control_TnJ
+0.4
-0.2
+0.6
-0.3
-0.1
phage
Laval1257
+0.6
-0.2
+0.7
-0.4
-0.0
phage
Bas52
+0.5
+0.4
+0.3
-0.1
-0.5
phage
EV116
-0.2
+0.8
-0.1
+0.7
-0.3
phage
Laval1261
+0.4
-0.1
+0.4
+0.1
+0.6
phage
Laval1261
+0.4
-0.0
+0.4
+0.6
+0.1
no phage control
Control_TnD
+0.3
+0.2
+0.5
+0.2
+0.6
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