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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_02136 and ECD_02137 are separated by 829 nucleotides
ECD_02137 and ECD_02138 are separated by 217 nucleotides
ECD_02138 and ECD_02139 are separated by 75 nucleotides
ECD_02139 and ECD_02140 overlap by 1 nucleotides
ECD_02136: ECD_02136 - ecotin, a serine protease inhibitor, at 2,197,555 to 2,198,043
_02136
ECD_02137: ECD_02137 - malate dehydrogenase, FAD/NAD(P)-binding domain, at 2,198,873 to 2,200,519
_02137
ECD_02138: ECD_02138 - microcin J25 efflux ABC transporter permease/ATPase, at 2,200,737 to 2,202,380
_02138
ECD_02139: ECD_02139 - oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions, at 2,202,456 to 2,203,106
_02139
ECD_02140: ECD_02140 - fused DNA-binding transcriptional dual regulator/O6-methylguanine-DNA methyltransferase, at 2,203,106 to 2,204,170
_02140
Group
Condition
ECD
_02136
ECD
_02137
ECD
_02138
ECD
_02139
ECD
_02140
phage
P2_phage_0.5625_MOI
+1.4
-0.4
-1.0
-0.1
-4.4
phage
EV116
-0.8
+0.7
-0.2
-0.0
-1.6
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.1
+0.5
-1.4
-0.1
-0.3
phage
Laval1257
-0.8
+0.1
-0.4
+0.2
-0.4
phage
Bas49
-0.7
+0.2
-0.2
+0.2
-0.7
phage
Bas26
-0.5
-0.2
+0.1
-0.0
-0.5
carbon source
D-Glucose
-0.4
-0.0
+0.2
-0.1
-0.6
phage
Ox4
+0.1
+0.2
-0.2
-0.1
-0.8
phage
Bas48
+0.2
-0.1
-0.2
-0.0
-0.7
phage
Bas29
-0.7
-0.3
+0.2
+0.2
-0.1
phage
Bas52
-0.3
-0.2
-0.2
-0.2
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.3
+0.2
-0.8
-0.2
+0.1
phage
K25
+0.4
+0.1
-0.1
-0.3
-0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.1
+0.3
-0.6
+0.2
-0.4
no phage control
Control_TnA
-0.8
+0.0
-0.1
-0.0
+0.5
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.1
+0.2
-0.6
-0.1
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.6
+0.2
-1.2
+0.0
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.4
+0.5
-0.9
-0.1
-0.1
phage
Bas32
-0.5
-0.1
+0.1
+0.2
+0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.5
+0.5
-0.7
+0.2
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.4
+0.3
-0.7
-0.1
+0.6
phage
CM1
-0.4
+0.6
-0.1
+0.0
+0.4
phage
Bas31
+0.2
-0.4
-0.0
+0.3
+0.5
no phage control
Control_TnH
+0.4
-0.1
-0.2
+0.2
+0.4
nophagecontrol
NoPhageControl
+0.4
-0.2
-0.3
+0.3
+0.5
phage
EV116
+0.6
+0.5
-0.3
-0.3
+0.3
phage
EV152
+0.8
+0.1
-0.1
+0.1
+0.3
phage
lambda1857_phage_12.5_MOI
+0.5
+0.3
+0.1
-0.0
+0.3
phage
Bas32
+0.3
+0.3
+0.3
-0.0
+0.4
phage
JK16
+0.7
+0.2
+0.1
-0.2
+0.6
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