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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_02087 and ECD_02088 are separated by 73 nucleotides
ECD_02088 and ECD_02089 are separated by 2 nucleotides
ECD_02089 and ECD_02090 are separated by 55 nucleotides
ECD_02090 and ECD_02091 are separated by 99 nucleotides
ECD_02087: ECD_02087 - UPF0324 family inner membrane protein, at 2,144,616 to 2,145,665
_02087
ECD_02088: ECD_02088 - endonuclease IV with intrinsic 3'-5' exonuclease activity, at 2,145,739 to 2,146,596
_02088
ECD_02089: ECD_02089 - putative kinase, at 2,146,599 to 2,147,687
_02089
ECD_02090: ECD_02090 - nucleoside permease, at 2,147,743 to 2,148,993
_02090
ECD_02091: ECD_02091 - ribonucleoside hydrolase 2, at 2,149,093 to 2,150,034
_02091
Group
Condition
ECD
_02087
ECD
_02088
ECD
_02089
ECD
_02090
ECD
_02091
phage
EV116
-0.5
-0.4
-0.0
-0.5
-1.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.1
-0.1
-1.5
+1.8
-2.1
phage
EV152
-0.1
-0.6
-0.6
+0.3
-0.9
phage
lambda1857_phage_12.5_MOI
-0.5
-0.5
+0.2
-1.7
+0.9
phage
Laval1259
-0.3
-0.4
-0.0
-0.1
-0.8
phage
Laval1257
+0.3
-0.2
-0.3
-1.2
-0.2
phage
Bas48
-0.2
-0.3
-0.1
-0.1
-0.7
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.1
-0.2
-1.4
+1.5
-1.3
phage
Bas34
+0.0
+0.1
-0.2
-0.7
-0.4
phage
Bas06
-0.3
+0.3
+0.2
+0.0
-1.4
phage
EV116
+0.4
-0.2
-1.0
+0.0
+0.1
no phage control
Control_TnJ
-0.0
+0.2
-0.2
+0.8
-1.3
phage
Laval1261
+0.2
+0.1
+0.1
+0.3
-1.0
phage
Bas18
+0.4
-0.6
-0.6
-0.2
+0.7
phage
Bas63
-0.2
+0.1
+0.2
+0.5
-0.9
phage
CM1
-0.0
-0.3
-0.5
+0.1
+0.5
phage
Bas24
+0.1
+0.0
-0.5
-0.2
+0.6
no phage control
Control_TnA
+0.4
+0.0
+0.3
-0.9
+0.2
phage
P2_phage_0.5625_MOI
-0.3
-0.3
+0.6
+0.3
+0.0
lb_plus_sm_buffer
NophageControl
-0.0
-0.0
+0.6
-0.5
+0.5
phage
Ox4
+0.3
-0.5
-0.3
+0.5
+0.6
phage
Bas27
+0.5
-0.3
+0.0
-0.1
+0.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.1
-0.1
-0.5
+1.6
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.7
+0.3
-1.0
+1.3
-0.4
nophagecontrol
NoPhageControl
+0.3
-0.0
+0.4
+0.8
-0.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.5
-0.3
-0.3
+2.4
-1.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.0
+0.1
-0.2
+1.6
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.1
-0.0
-0.7
+2.1
+0.3
phage
Bas63
+0.0
+0.5
+0.4
+0.4
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.0
+0.9
-0.1
+1.9
+0.1
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