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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_02052 and ECD_02053 are separated by 40 nucleotides
ECD_02053 and ECD_02054 are separated by 46 nucleotides
ECD_02054 and ECD_02055 overlap by 4 nucleotides
ECD_02055 and ECD_02056 are separated by 221 nucleotides
ECD_02052: ECD_02052 - lipoprotein, DUF1307 family, at 2,106,087 to 2,106,548
_02052
ECD_02053: ECD_02053 - DUF1456 family protein, at 2,106,589 to 2,107,059
_02053
ECD_02054: ECD_02054 - putative response regulator in two-component system withYehU, at 2,107,106 to 2,107,825
_02054
ECD_02055: ECD_02055 - inner membrane putative sensory kinase in two-component system with YehT, at 2,107,822 to 2,109,507
_02055
ECD_02056: ECD_02056 - transcriptional activator of csgD and csgBA, at 2,109,729 to 2,110,460
_02056
Group
Condition
ECD
_02052
ECD
_02053
ECD
_02054
ECD
_02055
ECD
_02056
phage
lambda1857_phage_12.5_MOI
-0.2
N.D.
-4.6
-0.5
-0.3
phage
P2_phage_0.5625_MOI
-2.2
N.D.
-1.0
+0.2
-1.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.9
N.D.
-1.9
-0.3
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.8
N.D.
-1.3
-0.3
-0.8
nophagecontrol
NoPhageControl
+0.1
N.D.
-3.7
-0.1
+0.6
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.6
N.D.
-0.1
-0.4
-1.8
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.6
N.D.
-0.3
-0.7
-1.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.2
N.D.
-1.6
-0.6
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.2
N.D.
+0.0
-0.3
-1.9
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.7
N.D.
-1.1
-0.5
+0.3
phage
Laval1257
-0.5
N.D.
-0.3
-1.1
+0.2
phage
EV116
+0.2
N.D.
+0.2
-1.0
-0.9
phage
EV152
-0.8
N.D.
+0.1
-0.4
-0.2
phage
JK16
+0.2
N.D.
-0.4
+0.1
-1.0
phage
EV116
-0.4
N.D.
-0.3
-0.5
+0.2
phage
Bas51
-0.5
N.D.
-1.0
+0.5
+0.5
phage
Bas51
-0.3
N.D.
-0.5
+0.4
+0.2
phage
Bas52
-0.2
N.D.
-0.9
+0.2
+0.7
phage
Bas48
-0.4
N.D.
-0.4
+0.4
+0.2
phage
EV152
-0.3
N.D.
-0.4
-0.0
+0.8
phage
Bas41
-0.6
N.D.
-0.3
+0.4
+0.6
phage
Bas58
-0.4
N.D.
-0.4
+0.5
+0.7
phage
Bas63
+0.6
N.D.
-0.5
+0.4
+0.5
phage
Bas24
-0.3
N.D.
+0.8
+0.0
+0.4
no phage control
Control_TnA
+0.1
N.D.
+0.7
-0.2
+0.5
phage
Bas63
-0.1
N.D.
+0.2
+0.4
+0.9
lb_plus_sm_buffer
NophageControl
+0.1
N.D.
+0.7
-0.0
+0.7
phage
N4
-0.2
N.D.
+0.9
+0.3
+0.5
phage
Bas28
+0.4
N.D.
+0.6
+0.2
+0.2
no phage control
Control_TnA
+0.3
N.D.
+0.6
+0.0
+0.6
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