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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_t00036 and ECD_01899 are separated by 55 nucleotides
ECD_01899 and ECD_01900 are separated by 64 nucleotides
ECD_01900 and ECD_01901 are separated by 11 nucleotides
ECD_01901 and ECD_01902 overlap by 4 nucleotides
ECD_t00036: ECD_t00036 - tRNA-Asn, at 1,967,408 to 1,967,483
_t00036
ECD_01899: ECD_01899 - L,D-transpeptidase linking Lpp to murein, at 1,967,539 to 1,968,471
_01899
ECD_01900: ECD_01900 - nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase, at 1,968,536 to 1,969,615
_01900
ECD_01901: ECD_01901 - cobalamin synthase, at 1,969,627 to 1,970,370
_01901
ECD_01902: ECD_01902 - cobinamide kinase and cobinamide phosphate guanylyltransferase, at 1,970,367 to 1,970,912
_01902
Group
Condition
ECD
_t00036
ECD
_01899
ECD
_01900
ECD
_01901
ECD
_01902
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
-3.2
-2.3
+0.3
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
-1.8
-1.1
+0.4
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
-1.6
-1.7
+0.8
N.D.
phage
lambda1857_phage_12.5_MOI
N.D.
-1.2
-1.2
+0.4
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
-1.0
-0.8
-0.0
N.D.
no phage control
Control_TnD
N.D.
+0.2
-1.1
-0.5
N.D.
nophagecontrol
NoPhageControl
N.D.
-0.7
-0.9
+0.5
N.D.
phage
EV116
N.D.
-0.7
+0.2
-0.6
N.D.
phage
Laval1261
N.D.
-0.1
-0.8
-0.1
N.D.
phage
EV116
N.D.
-1.3
+0.1
+0.2
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
-1.5
+0.3
+0.4
N.D.
phage
Bas63
N.D.
-0.4
-0.1
-0.4
N.D.
phage
Bas28
N.D.
+0.2
-0.9
-0.1
N.D.
phage
N4
N.D.
+0.1
-0.5
-0.3
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
-0.4
-0.8
+0.6
N.D.
phage
Bas34
N.D.
-0.1
-0.6
+0.2
N.D.
phage
Bas34
N.D.
-0.2
-0.5
+0.2
N.D.
phage
Bas06
N.D.
-0.4
+0.2
-0.3
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
-0.7
-0.1
+0.5
N.D.
phage
Bas50
N.D.
+0.3
-0.2
-0.3
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
-0.8
+0.3
+0.3
N.D.
phage
CM1
N.D.
+0.6
+0.0
-0.7
N.D.
balo
Mixed culture, Halobacteriovorax-10
N.D.
-0.4
+0.3
+0.2
N.D.
phage
Laval1263
N.D.
-0.3
+0.2
+0.4
N.D.
phage
Laval1267
N.D.
-0.1
+0.7
-0.1
N.D.
lb_plus_sm_buffer
NophageControl
N.D.
+0.3
+0.2
+0.4
N.D.
no phage control
Control_TnA
N.D.
-0.0
+0.6
+0.3
N.D.
phage
Laval1257
N.D.
+1.2
+0.3
-0.3
N.D.
phage
Bas24
N.D.
+0.5
+0.6
+0.3
N.D.
phage
P2_phage_0.5625_MOI
N.D.
+0.3
-0.1
+1.8
N.D.
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