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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_01839 and ECD_01840 are separated by 52 nucleotides
ECD_01840 and ECD_01841 are separated by 40 nucleotides
ECD_01841 and ECD_01842 overlap by 4 nucleotides
ECD_01842 and ECD_01843 are separated by 164 nucleotides
ECD_01839: ECD_01839 - UPF0759 family protein, at 1,897,313 to 1,898,131
_01839
ECD_01840: ECD_01840 - MAPEG family inner membrane protein, at 1,898,184 to 1,898,579
_01840
ECD_01841: ECD_01841 - carboxy-SAM synthase, at 1,898,620 to 1,899,363
_01841
ECD_01842: ECD_01842 - tRNA (cmo5U34)-carboxymethyltransferase, carboxy-SAM-dependent, at 1,899,360 to 1,900,331
_01842
ECD_01843: ECD_01843 - trimethylamine N-oxide reductase system III, catalytic subunit, at 1,900,496 to 1,902,925
_01843
Group
Condition
ECD
_01839
ECD
_01840
ECD
_01841
ECD
_01842
ECD
_01843
phage
P2_phage_0.5625_MOI
N.D.
N.D.
-1.0
-4.3
-0.8
phage
lambda1857_phage_12.5_MOI
N.D.
N.D.
-0.8
-3.2
+0.1
nophagecontrol
NoPhageControl
N.D.
N.D.
-1.2
-1.3
-0.5
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
N.D.
-1.2
-0.6
-0.5
phage
Bas34
N.D.
N.D.
-0.2
-2.1
+0.0
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
N.D.
-0.4
+0.1
-1.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
N.D.
-1.8
+0.6
-0.5
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
N.D.
-1.2
+0.3
-0.3
lb_plus_sm_buffer
NophageControl
N.D.
N.D.
-0.8
+0.2
-0.7
phage
Laval1257
N.D.
N.D.
-0.4
-0.8
-0.0
phage
Bas26
N.D.
N.D.
-0.9
-0.4
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
N.D.
+0.3
-0.3
-0.9
phage
Laval1261
N.D.
N.D.
+0.5
-1.0
-0.1
phage
Bas31
N.D.
N.D.
+0.0
-0.9
+0.4
phage
Bas24
N.D.
N.D.
-1.0
+0.8
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
N.D.
+0.1
+0.8
-1.3
no phage control
Control_TnJ
N.D.
N.D.
+0.3
-1.4
+0.8
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
N.D.
+0.6
+0.3
-1.0
phage
EV116
N.D.
N.D.
-0.1
-0.4
+0.7
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
N.D.
-0.3
+1.0
-0.4
phage
EV116
N.D.
N.D.
-0.0
+0.9
-0.2
phage
Bas51
N.D.
N.D.
+0.8
+0.5
-0.3
phage
Laval1259
N.D.
N.D.
+0.5
+0.7
-0.2
phage
Bas52
N.D.
N.D.
+1.0
+1.0
-0.5
phage
Bas52
N.D.
N.D.
+1.1
+0.9
-0.3
phage
Bas58
N.D.
N.D.
+0.8
+1.1
-0.2
phage
Ox4
N.D.
N.D.
+1.4
+0.2
+0.4
phage
Ox4
N.D.
N.D.
+0.8
+1.3
-0.1
phage
Bas51
N.D.
N.D.
+1.2
+1.0
-0.0
phage
CM1
N.D.
N.D.
+1.3
+0.9
-0.0
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