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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_01109 and ECD_01110 are separated by 143 nucleotides
ECD_01110 and ECD_01111 are separated by 127 nucleotides
ECD_01111 and ECD_01112 are separated by 261 nucleotides
ECD_01112 and ECD_01113 overlap by 8 nucleotides
ECD_01109: ECD_01109 - L,D-transpeptidase linking Lpp to murein, at 1,172,005 to 1,172,967
_01109
ECD_01110: ECD_01110 - transcription-repair coupling factor, at 1,173,111 to 1,176,557
_01110
ECD_01111: ECD_01111 - inner membrane protein, at 1,176,685 to 1,177,758
_01111
ECD_01112: ECD_01112 - lipoprotein-releasing system transmembrane protein, at 1,178,020 to 1,179,219
_01112
ECD_01113: ECD_01113 - outer membrane-specific lipoprotein transporter subunit, at 1,179,212 to 1,179,913
_01113
Group
Condition
ECD
_01109
ECD
_01110
ECD
_01111
ECD
_01112
ECD
_01113
phage
lambda1857_phage_12.5_MOI
-2.4
-0.3
-2.2
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-2.2
-1.3
-0.7
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-2.2
-0.7
-0.5
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-1.8
-1.5
-0.1
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-1.7
-0.6
-0.8
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-1.5
-0.2
-0.6
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.5
-1.0
-0.5
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-1.0
+0.0
-1.2
N.D.
N.D.
nophagecontrol
NoPhageControl
-0.3
-0.9
-0.8
N.D.
N.D.
lb_plus_sm_buffer
NophageControl
-1.4
-0.0
-0.5
N.D.
N.D.
phage
P2_phage_0.5625_MOI
-2.9
+0.6
+0.6
N.D.
N.D.
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.9
-0.7
-0.1
N.D.
N.D.
no phage control
Control_TnD
-0.9
-0.1
-0.6
N.D.
N.D.
phage
Bas29
-0.9
-0.3
-0.4
N.D.
N.D.
phage
Bas27
+0.1
-0.3
-0.9
N.D.
N.D.
phage
N4
-1.1
+0.4
-0.4
N.D.
N.D.
phage
Laval1261
-0.6
-0.0
-0.4
N.D.
N.D.
phage
Bas58
-0.2
+0.3
-0.8
N.D.
N.D.
phage
Bas06
-1.2
+0.2
+0.3
N.D.
N.D.
phage
Bas30
-0.8
+0.1
+0.3
N.D.
N.D.
phage
Bas24
-0.3
+0.7
-0.3
N.D.
N.D.
phage
Laval1257
-0.3
+1.0
-0.5
N.D.
N.D.
phage
Bas48
+0.7
+0.0
-0.4
N.D.
N.D.
phage
Ox4
+0.1
+1.1
-0.8
N.D.
N.D.
no phage control
Control_TnA
+0.5
+0.3
-0.4
N.D.
N.D.
no phage control
Control_TnA
+1.0
-0.1
-0.5
N.D.
N.D.
phage
Laval1259
+0.5
+0.2
-0.3
N.D.
N.D.
phage
Bas18
+0.9
-0.4
+0.4
N.D.
N.D.
phage
Ox4
-0.1
+1.2
-0.2
N.D.
N.D.
phage
CM1
+0.7
+0.3
+0.3
N.D.
N.D.
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