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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_01011 and ECD_01012 are separated by 9 nucleotides
ECD_01012 and ECD_01013 are separated by 7 nucleotides
ECD_01013 and ECD_01014 are separated by 11 nucleotides
ECD_01014 and ECD_01015 overlap by 1 nucleotides
ECD_01011: ECD_01011 - putative malonic semialdehyde reductase, at 1,074,647 to 1,075,237
_01011
ECD_01012: ECD_01012 - putative reactive intermediate detoxifying aminoacrylate hydrolase, at 1,075,247 to 1,076,047
_01012
ECD_01013: ECD_01013 - putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity, at 1,076,055 to 1,076,441
_01013
ECD_01014: ECD_01014 - ureidoacrylate amidohydrolase, at 1,076,453 to 1,077,145
_01014
ECD_01015: ECD_01015 - pyrimidine oxygenase, FMN-dependent, at 1,077,145 to 1,078,293
_01015
Group
Condition
ECD
_01011
ECD
_01012
ECD
_01013
ECD
_01014
ECD
_01015
phage
EV116
N.D.
-1.3
-1.2
-0.6
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
+0.1
-0.3
-2.3
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
N.D.
+0.0
-0.6
-1.2
-0.8
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
N.D.
-0.5
+0.0
-1.8
-0.3
phage
Bas34
N.D.
-1.5
-0.0
-0.8
-0.2
phage
P2_phage_0.5625_MOI
N.D.
+1.6
-0.4
-2.9
-0.3
phage
Ox4
N.D.
+0.2
+0.3
-1.9
-0.4
phage
lambda1857_phage_12.5_MOI
N.D.
+0.0
-0.9
-0.4
-0.5
phage
Bas26
N.D.
-0.6
-0.6
-0.4
-0.2
lb_plus_sm_buffer
NophageControl
N.D.
-1.0
-0.2
-0.3
+0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
N.D.
+0.9
+0.7
-1.1
-1.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
-0.3
+0.5
-1.0
-0.1
phage
Bas14
N.D.
-1.1
+0.2
+0.1
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
N.D.
-0.4
+1.1
-0.4
-0.8
balo
Mixed culture, Halobacteriovorax-1
N.D.
+0.5
+0.1
-0.9
+0.0
phage
Ox4
N.D.
-0.5
+0.5
-0.4
+0.2
phage
EV152
N.D.
+1.0
-0.2
-0.6
-0.3
phage
Bas34
N.D.
+0.6
+0.3
-0.4
-0.3
nophagecontrol
NoPhageControl
N.D.
+0.7
-0.6
+0.4
-0.3
phage
Bas30
N.D.
-0.6
+0.4
+0.4
+0.2
phage
Laval1257
N.D.
+0.8
-0.9
+0.9
-0.4
phage
Bas29
N.D.
+0.7
+0.3
+0.1
-0.7
phage
Bas51
N.D.
+0.7
+0.5
-0.3
-0.4
phage
Laval1263
N.D.
+1.3
-0.5
-0.1
-0.1
phage
JK16
N.D.
+1.0
-0.4
-0.3
+0.4
phage
Bas52
N.D.
+1.3
+0.5
-0.5
-0.2
phage
Bas51
N.D.
+1.5
+0.3
+0.5
-0.4
phage
Bas50
N.D.
+0.1
+0.8
+0.5
+0.5
no phage control
Control_TnD
N.D.
+0.7
+0.4
+0.5
+0.3
phage
CM1
N.D.
+0.9
+0.5
+0.9
+0.2
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