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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00984 and ECD_00985 are separated by 19 nucleotides
ECD_00985 and ECD_00986 overlap by 13 nucleotides
ECD_00986 and ECD_00987 are separated by 45 nucleotides
ECD_00987 and ECD_00988 overlap by 1 nucleotides
ECD_00984: ECD_00984 - tyrosine-protein kinase, role in O-antigen capsule formation, at 1,047,119 to 1,049,299
_00984
ECD_00985: ECD_00985 - O-antigen capsule forming protein-tyrosine-phosphatase; Etk-P dephosphorylase, at 1,049,319 to 1,049,765
_00985
ECD_00986: ECD_00986 - putative O-antigen capsule outer membrane auxillary protein export channel, at 1,049,753 to 1,050,892
_00986
ECD_00987: ECD_00987 - putative O-antigen capsule production periplasmic protein, at 1,050,938 to 1,053,034
_00987
ECD_00988: ECD_00988 - putative O-antigen capsule production periplasmic protein, at 1,053,034 to 1,053,780
_00988
Group
Condition
ECD
_00984
ECD
_00985
ECD
_00986
ECD
_00987
ECD
_00988
no phage control
Control_TnJ
+0.3
-1.3
-1.1
+0.2
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.0
-1.6
+0.1
-0.5
+0.3
phage
Laval1257
-0.2
+0.2
-1.9
-0.3
+0.4
phage
P2_phage_0.5625_MOI
-0.2
-0.5
-1.4
-0.6
+1.1
lb_plus_sm_buffer
NoPhageControl
+0.1
-1.8
+0.2
+0.0
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.5
-1.0
-0.4
-0.4
+0.1
nophagecontrol
NoPhageControl
-0.7
+0.9
-1.0
-0.1
-0.3
phage
N4
-0.6
-0.4
-0.3
-0.2
+0.2
phage
Bas52
-0.3
+0.2
-0.2
-0.8
+0.3
phage
Bas50
+0.0
-0.5
+0.4
-0.5
-0.2
phage
Bas26
+0.1
-1.1
-0.1
+0.1
+0.2
no phage control
Control_TnA
+0.2
-1.5
+0.2
+0.2
+0.2
phage
EV152
+0.6
-0.4
-0.1
-0.2
-0.6
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.5
-0.1
+0.3
-0.6
+0.5
phage
Bas29
-1.1
+0.5
+0.1
+0.3
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.2
-0.5
+0.4
-0.6
+0.3
phage
Bas24
-0.2
-0.1
-0.6
-0.0
+0.8
phage
Bas51
-0.3
+0.0
+0.5
-0.5
+0.2
phage
Bas48
-0.1
+0.5
-0.4
-0.3
+0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+1.0
-0.4
-0.2
-0.3
-0.1
phage
lambda1857_phage_12.5_MOI
-1.2
+1.1
-0.4
-0.2
+0.8
phage
HSDP3
-0.1
+0.2
+0.4
-0.4
+0.7
phage
Ox4
-0.2
+0.9
-0.4
-0.0
+0.4
phage
EV116
-0.4
+0.7
-0.0
-0.4
+0.9
phage
Laval1263
-0.1
+0.2
+0.6
-0.2
+0.3
phage
Ox4
+0.3
-0.5
+0.2
-0.2
+0.9
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.4
+0.7
-0.5
-0.0
+0.4
phage
Bas69
+0.1
+0.8
+0.4
-0.4
+0.3
phage
Bas26
+0.1
+0.5
+0.1
+0.1
+0.7
lb_plus_sm_buffer
NophageControl
+0.2
+0.8
+0.4
+0.2
+0.1
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