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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00975 and ECD_00976 overlap by 4 nucleotides
ECD_00976 and ECD_00977 are separated by 18 nucleotides
ECD_00977 and ECD_00978 overlap by 4 nucleotides
ECD_00978 and ECD_00979 overlap by 4 nucleotides
ECD_00975: ECD_00975 - hydrogenase 1, small subunit, at 1,037,228 to 1,038,346
_00975
ECD_00976: ECD_00976 - hydrogenase 1, large subunit, at 1,038,343 to 1,040,136
_00976
ECD_00977: ECD_00977 - hydrogenase 1, b-type cytochrome subunit, at 1,040,155 to 1,040,862
_00977
ECD_00978: ECD_00978 - hydrogenase 1 maturation protease, at 1,040,859 to 1,041,446
_00978
ECD_00979: ECD_00979 - putative HyaA chaperone, at 1,041,443 to 1,041,841
_00979
Group
Condition
ECD
_00975
ECD
_00976
ECD
_00977
ECD
_00978
ECD
_00979
phage
P2_phage_0.5625_MOI
-0.7
-1.4
-0.6
-0.9
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.6
-1.3
-0.3
-0.7
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.0
-1.7
-0.2
-0.1
-0.3
phage
Laval1257
-0.1
-0.2
-1.1
-0.7
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.5
-0.6
+0.1
+0.3
-1.2
phage
EV116
-0.2
+0.2
-0.3
-1.1
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.2
-0.2
-0.6
-0.3
-0.0
balo
Mixed culture, Halobacteriovorax-10
-0.0
+0.1
-0.4
-0.8
-0.2
no phage control
Control_TnN
-0.2
+0.3
-0.4
-0.4
-0.1
phage
Bas26
-0.3
+0.5
-0.3
-0.8
+0.0
phage
Ox4
+0.1
-0.4
-0.5
+0.2
-0.3
phage
Bas32
+0.1
+0.1
-0.2
-0.7
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.3
-1.0
-0.4
+0.1
+0.3
no phage control
Control_TnA
-0.1
+0.1
-0.6
+0.2
-0.3
phage
Bas63
-0.3
+0.4
-0.4
-0.5
+0.2
phage
Bas33
-0.0
+0.3
-0.2
-0.8
+0.0
lb_plus_sm_buffer
NophageControl
-0.1
+0.2
-0.9
+0.1
+0.2
phage
Bas26
+0.3
+0.1
-0.4
-0.2
-0.2
phage
K25
-0.0
-0.2
+0.5
-0.7
-0.2
phage
Bas63
-0.3
+0.3
-0.1
-0.5
+0.2
phage
Bas52
-0.5
+0.2
+0.1
+0.2
-0.4
nophagecontrol
NoPhageControl
-0.5
-0.7
+0.4
+0.2
+0.6
no phage control
Control_TnJ
-0.4
-0.2
+0.3
+0.5
-0.0
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.1
-0.9
-0.1
+0.8
+0.4
phage
Bas69
-0.4
+0.4
-0.2
+0.1
+0.4
phage
Bas27
-0.1
+0.3
+0.1
+0.5
-0.5
phage
Bas29
-0.1
+0.5
+0.4
-0.2
+0.1
phage
Bas50
+0.2
+0.3
+0.4
+0.4
-0.5
lb_plus_sm_buffer
NoPhageControl
+0.0
-0.2
+0.2
+0.6
+0.2
phage
lambda1857_phage_12.5_MOI
+0.4
+0.3
+0.2
+0.8
-0.5
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