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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00742 and ECD_00743 overlap by 4 nucleotides
ECD_00743 and ECD_00744 overlap by 14 nucleotides
ECD_00744 and ECD_00745 overlap by 8 nucleotides
ECD_00745 and ECD_00746 are separated by 578 nucleotides
ECD_00742: ECD_00742 - biotin synthase, at 793,337 to 794,377
_00742
ECD_00743: ECD_00743 - 8-amino-7-oxononanoate synthase, at 794,374 to 795,528
_00743
ECD_00744: ECD_00744 - malonyl-ACP O-methyltransferase, SAM-dependent, at 795,515 to 796,270
_00744
ECD_00745: ECD_00745 - dethiobiotin synthetase, at 796,263 to 796,940
_00745
ECD_00746: ECD_00746 - exision nuclease of nucleotide excision repair, DNA damage recognition component, at 797,519 to 799,540
_00746
Group
Condition
ECD
_00742
ECD
_00743
ECD
_00744
ECD
_00745
ECD
_00746
phage
EV116
-0.1
+0.3
-0.5
-0.1
-1.3
phage
Bas51
-0.4
-0.2
+0.0
-0.1
-1.0
phage
Bas30
+0.0
-0.4
-0.3
-0.4
-0.4
phage
Bas58
+0.2
+0.0
-0.4
-0.3
-0.9
phage
Ox4
-1.0
-0.1
+0.3
+0.2
-0.7
phage
Bas52
-0.2
+0.1
-0.1
-0.2
-0.9
phage
Bas14
+0.3
-0.0
-0.5
+0.0
-0.7
phage
Bas14
-0.3
+0.2
+0.1
-0.0
-0.8
phage
Laval1259
+0.2
-0.0
-0.8
+0.3
-0.4
phage
EV116
+0.4
+0.6
+0.1
-0.4
-1.4
phage
Laval1257
-1.1
+0.2
+0.2
+0.3
-0.2
phage
EV152
+0.7
+0.1
-0.2
+0.1
-1.0
nophagecontrol
NoPhageControl
+0.7
+0.4
+0.5
+0.1
-1.9
phage
Laval1267
+0.4
+0.3
-0.6
+0.2
-0.2
phage
CM1
+0.5
-0.0
-0.5
+0.3
-0.1
phage
Bas18
+0.1
+0.2
+0.5
-0.0
-0.6
phage
EV152
+0.1
+0.1
+0.7
+0.2
-0.8
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.1
+0.7
+0.9
-0.8
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.0
+0.5
+0.7
+0.0
-0.7
phage
N4
-0.3
-0.2
+0.3
+0.3
+0.4
phage
Bas63
+0.6
+0.1
+0.2
+0.2
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.3
+0.8
+0.3
-0.1
-0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.2
+0.6
+0.8
-0.1
-0.4
phage
lambda1857_phage_12.5_MOI
+1.6
+0.7
+1.0
-0.1
-2.0
no phage control
Control_TnJ
-0.0
-0.1
+0.8
+0.5
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
+0.8
+0.7
-0.6
+0.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.3
+0.5
+0.8
+0.1
-0.0
phage
P2_phage_0.5625_MOI
+1.6
+0.6
+2.3
+0.2
-3.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.5
+0.7
+0.9
+0.1
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.5
+0.5
+1.0
+0.1
+0.3
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