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Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00581 and ECD_00582 overlap by 26 nucleotides
ECD_00582 and ECD_00583 are separated by 3 nucleotides
ECD_00583 and ECD_00584 are separated by 10 nucleotides
ECD_00584 and ECD_00585 overlap by 4 nucleotides
ECD_00581: ECD_00581 - 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase, at 606,461 to 607,339
_00581
ECD_00582: ECD_00582 - apo-citrate lyase phosphoribosyl-dephospho-CoA transferase, at 607,314 to 607,865
_00582
ECD_00583: ECD_00583 - citrate lyase, citrate-ACP transferase (alpha) subunit, at 607,869 to 609,401
_00583
ECD_00584: ECD_00584 - citrate lyase, citryl-ACP lyase (beta) subunit, at 609,412 to 610,320
_00584
ECD_00585: ECD_00585 - citrate lyase, acyl carrier (gamma) subunit, at 610,317 to 610,613
_00585
Group
Condition
ECD
_00581
ECD
_00582
ECD
_00583
ECD
_00584
ECD
_00585
phage
Laval1257
-0.4
-0.3
-0.6
-0.9
-0.9
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.1
+0.1
+0.1
+0.6
-2.3
phage
Bas26
-0.0
-0.3
-0.3
-0.1
-0.6
phage
Bas26
+0.1
+0.3
+0.1
-0.3
-1.4
no phage control
Control_TnJ
-0.1
+0.2
-0.2
-0.4
-0.6
no phage control
Control_TnN
-0.1
-0.0
-0.1
+0.2
-1.0
no phage control
Control_TnH
-0.3
-0.0
+0.2
-0.1
-0.8
lb_plus_sm_buffer
NophageControl
+0.1
-1.1
-0.0
+0.6
-0.5
no phage control
Control_TnD
+0.2
+0.1
-0.1
-0.7
-0.3
phage
lambda1857_phage_12.5_MOI
+0.6
-0.2
-0.6
-0.5
+0.3
phage
JK16
+0.1
+0.1
+0.3
-0.7
-0.3
nophagecontrol
NoPhageControl
+0.3
+0.2
+0.3
-0.2
-0.9
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.7
-0.3
+0.1
+0.3
+0.3
phage
Bas52
-0.2
+0.6
+0.3
-0.1
-0.7
phage
P2_phage_0.5625_MOI
+1.0
-0.1
-0.0
-1.0
-0.1
phage
Bas32
-0.1
+0.6
+0.0
-0.2
-0.3
phage
Bas30
+0.2
+0.3
+0.2
-0.3
-0.5
phage
Bas50
+0.2
+0.9
+0.1
-0.6
-0.3
phage
Bas29
+0.3
+0.6
-0.3
+0.1
-0.2
phage
Bas51
-0.0
+0.8
-0.2
-0.5
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-0.5
+0.2
+0.2
+0.3
+0.5
phage
Ox4
-0.1
+0.1
-0.1
+1.0
-0.2
phage
Bas52
-0.3
+0.4
+0.1
-0.0
+0.6
phage
Bas58
-0.1
+0.6
+0.3
-0.1
+0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.1
+0.6
+0.2
+0.2
+0.3
no phage control
Control_TnA
+0.2
+0.3
+0.1
-0.1
+0.7
phage
Bas48
+0.2
+0.4
-0.1
+0.3
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
-0.1
-0.1
+0.1
+0.4
+0.9
phage
CM1
+0.3
+0.2
+0.5
+0.2
+0.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.1
+0.5
+0.1
+0.7
+0.5
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