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Cofit
Protein
Homologs
Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00416 and ECD_00417 are separated by 211 nucleotides
ECD_00417 and ECD_00418 are separated by 13 nucleotides
ECD_00418 and ECD_00419 are separated by 69 nucleotides
ECD_00419 and ECD_00420 are separated by 152 nucleotides
ECD_00416: ECD_00416 - mechanosensitive channel protein, intermediate conductance, K+ regulated, at 455,582 to 458,944
_00416
ECD_00417: ECD_00417 - DUF2496 family protein, at 459,156 to 459,317
_00417
ECD_00418: ECD_00418 - primosomal replication protein N'', at 459,331 to 459,858
_00418
ECD_00419: ECD_00419 - DUF454 family inner membrane protein, at 459,928 to 460,305
_00419
ECD_00420: ECD_00420 - adenine phosphoribosyltransferase, at 460,458 to 461,009
_00420
Group
Condition
ECD
_00416
ECD
_00417
ECD
_00418
ECD
_00419
ECD
_00420
phage
Bas51
-0.1
-0.9
-1.6
-0.1
-1.5
phage
CM1
+0.0
-0.4
-1.1
+0.4
-2.6
phage
Ox4
-0.1
-1.2
-1.3
+0.0
-1.0
phage
Laval1259
+0.0
-0.8
-0.4
-0.1
-1.6
phage
Bas52
-0.1
-0.3
-1.4
-0.1
-0.8
phage
JK16
+0.1
-0.4
-0.6
-0.2
-1.1
phage
Bas58
+0.1
-0.4
-1.0
-0.2
-0.6
phage
Bas52
-0.1
-0.3
-1.3
-0.1
-0.2
no phage control
Control_TnA
-0.1
-0.5
+0.1
-0.1
-1.3
phage
Bas51
+0.1
+0.2
-0.6
-0.1
-1.0
phage
N4
+0.1
+0.1
+0.2
+0.2
-1.7
phage
EV152
+0.1
+0.5
-0.4
-0.2
-0.7
no phage control
Control_TnN
-0.1
-0.6
+0.7
-0.1
-0.6
no phage control
Control_TnD
-0.0
-0.5
+0.6
+0.2
-0.7
nophagecontrol
NoPhageControl
+0.3
+0.9
+1.3
+0.4
-3.1
phage
Laval1261
+0.2
-0.9
+0.6
+0.1
-0.0
phage
Laval1257
-0.2
+0.5
+0.8
-0.1
-1.0
lb_plus_sm_buffer
NophageControl
+0.0
-0.2
-0.5
+0.3
+0.9
phage
P2_phage_0.5625_MOI
+0.2
+1.8
+0.1
-0.3
-0.7
phage
lambda1857_phage_12.5_MOI
-0.0
+1.3
+0.6
+0.2
-0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.2
+1.0
+0.6
+0.6
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.2
+1.0
+0.5
+0.6
-0.1
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
+0.9
+0.3
+0.2
+0.7
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.3
+1.2
+1.0
+0.4
-0.0
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.2
+1.1
+0.6
+0.5
+0.6
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.2
+1.3
+0.5
+0.5
+0.9
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.2
+1.2
+0.6
+0.7
+0.7
phage
EV116
-0.1
+3.7
+1.3
-0.0
-1.1
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.4
+1.5
+0.7
+0.5
+0.9
phage
EV116
-0.1
+4.0
+2.2
+0.5
+1.0
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