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Fitness for 5 genes in
Escherichia coli BL21
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500 nt
ECD_00384 and ECD_00385 are separated by 43 nucleotides
ECD_00385 and ECD_00386 are separated by 304 nucleotides
ECD_00386 and ECD_00387 are separated by 343 nucleotides
ECD_00387 and ECD_00388 are separated by 245 nucleotides
ECD_00384: ECD_00384 - muropeptide transporter, at 419,754 to 421,229
_00384
ECD_00385: ECD_00385 - putative lipoprotein, at 421,273 to 421,851
_00385
ECD_00386: ECD_00386 - stationary-phase morphogene, transcriptional repressor for mreB; also regulator for dacA, dacC, and ampC, at 422,156 to 422,473
_00386
ECD_00387: ECD_00387 - peptidyl-prolyl cis/trans isomerase (trigger factor), at 422,817 to 424,115
_00387
ECD_00388: ECD_00388 - proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine proteases, at 424,361 to 424,984
_00388
Group
Condition
ECD
_00384
ECD
_00385
ECD
_00386
ECD
_00387
ECD
_00388
carbon source
L-Arabinose
-3.8
-4.6
+0.1
-0.9
-1.9
carbon source
L-Arabinose
-3.2
-3.5
-0.2
-0.6
-2.2
carbon source
Sodium-DL-Lactate
-1.6
-0.1
-0.1
-0.3
-3.3
carbon source
Sodium-DL-Lactate
-1.2
-0.5
+0.2
-0.2
-2.9
balo
Mixed culture, Halobacteriovorax-10
-0.3
-0.9
+0.0
-0.2
-3.0
stress
Tailocin 256
-0.2
-0.1
-0.5
-5.7
+2.4
carbon source
Casamino-acids
-1.4
-0.3
+0.1
-0.6
-1.6
carbon source
L-Rhamnose
-1.5
-0.2
+0.2
-0.6
-1.6
carbon source
L-Rhamnose
-1.5
-0.6
+0.1
-0.1
-1.2
carbon source
D-Glucose
-1.3
-0.4
+0.3
-0.4
-1.3
lb_plus_sm_buffer
NoPhageControl
-2.3
-1.1
-0.1
+0.1
+0.3
balo
Mixed culture, Halobacteriovorax-10
-0.2
-0.4
+0.1
-0.1
-2.4
balo
Mixed culture, Halobacteriovorax-1
-0.2
-0.7
-0.1
-0.2
-1.8
carbon source
Casamino-acids
-1.5
-0.3
+0.3
-0.3
-0.4
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
-1.0
+0.7
+0.6
+0.3
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
-0.9
+0.7
+0.7
+0.8
-0.3
nophagecontrol
NoPhageControl
+0.5
+0.6
+0.2
+1.1
-0.4
phage
Bas24
-0.5
+0.2
+0.2
+1.4
+1.4
phage
Bas58
+0.4
-0.3
+0.0
+1.1
+1.4
phage
Bas52
-0.0
+0.1
-0.7
+1.7
+1.8
phage
Laval1257
-0.5
-0.1
-0.1
+1.8
+2.3
phage
lambda1857_phage_12.5_MOI
-0.3
-0.0
+0.3
+1.1
+2.4
phage
Bas51
+0.4
-0.1
-0.3
+1.7
+1.8
phage
Bas52
+0.3
+0.1
-0.3
+1.7
+2.0
phage
Bas51
+0.2
+0.2
-0.1
+1.9
+1.8
phage
CM1
+0.2
+0.7
-0.6
+2.0
+1.9
phage
EV116
-0.3
+0.1
-0.2
+3.2
+1.6
phage
P2_phage_0.5625_MOI
+0.2
+0.0
+0.9
+2.9
+0.8
phage
Bas49
+0.4
+0.5
-1.0
+1.0
+4.4
phage
EV116
-0.3
-0.1
+0.3
+3.5
+2.0
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