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Fitness for 5 genes in
Escherichia coli BL21
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
ECD_00302 and ECD_00303 are separated by 17 nucleotides
ECD_00303 and ECD_00304 are separated by 9 nucleotides
ECD_00304 and ECD_00305 overlap by 4 nucleotides
ECD_00305 and ECD_00306 overlap by 4 nucleotides
ECD_00302: ECD_00302 - 2,3-dihydroxyphenylpropionate 1,2-dioxygenase, at 339,812 to 340,756
_00302
ECD_00303: ECD_00303 - 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase, at 340,774 to 341,640
_00303
ECD_00304: ECD_00304 - 2-keto-4-pentenoate hydratase, at 341,650 to 342,459
_00304
ECD_00305: ECD_00305 - acetaldehyde-CoA dehydrogenase II, NAD-binding, at 342,456 to 343,406
_00305
ECD_00306: ECD_00306 - 4-hyroxy-2-oxovalerate/4-hydroxy-2-oxopentanoic acid aldolase, class I, at 343,403 to 344,416
_00306
Group
Condition
ECD
_00302
ECD
_00303
ECD
_00304
ECD
_00305
ECD
_00306
phage
Bas24
-0.2
-0.6
+0.0
+0.0
-0.4
phage
Bas52
-0.2
-1.1
-0.1
-0.1
+0.3
phage
Laval1257
-0.0
-0.5
-0.4
-0.1
-0.2
phage
Bas34
-0.5
-0.3
-0.2
+0.1
-0.2
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
-0.1
-0.6
-0.4
-0.2
+0.4
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_10
+0.3
-1.1
-0.2
-0.2
+0.3
phage
Bas26
-0.1
-0.5
-0.0
+0.2
-0.2
no phage control
Control_TnD
+0.1
-0.5
+0.1
-0.0
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.2
-0.6
-0.4
-0.2
+0.2
no phage control
Control_TnA
-0.5
+0.4
-0.4
+0.1
-0.2
phage
Bas50
-0.1
-0.5
-0.3
-0.0
+0.3
phage
CM1
-0.1
-0.2
+0.1
+0.1
-0.5
phage
Bas52
-0.4
+0.1
-0.2
-0.2
+0.2
phage
Bas28
-0.3
+0.2
+0.2
-0.2
-0.3
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.1
-0.6
-0.2
-0.1
+0.2
lb_plus_sm_buffer
NophageControl
+0.2
-0.4
-0.3
-0.1
+0.1
phage
EV152
+0.2
-0.3
-0.1
-0.1
-0.2
phage
Ox4
-0.1
-0.7
+0.1
+0.3
-0.0
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
-1.1
-0.2
+0.0
+0.6
balo
Mixed culture, Bdellovibrio bacteriovorus Tiebrius_1
+0.2
-0.6
-0.2
-0.0
+0.3
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_10
+0.3
-0.6
-0.3
-0.2
+0.6
balo
Mixed culture, Bdellovibrio bacteriovorus HD100_1
+0.3
-0.6
-0.2
-0.2
+0.4
phage
EV116
+0.1
+0.4
-0.6
-0.2
+0.0
phage
Bas63
+0.0
-0.3
-0.2
-0.1
+0.4
phage
Bas51
-0.0
-0.4
-0.3
+0.1
+0.6
phage
K25
-0.0
+0.0
+0.3
-0.4
+0.2
phage
P2_phage_0.5625_MOI
+0.2
-0.9
+0.4
+0.6
-0.1
phage
lambda1857_phage_12.5_MOI
+0.4
+0.1
-0.5
+0.1
+0.4
lb_plus_sm_buffer
NoPhageControl
+0.3
+0.0
-0.1
-0.1
+0.5
nophagecontrol
NoPhageControl
-0.4
+0.2
+0.0
+0.5
+0.5
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